RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 ZNF318Q5VUA4 2279 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 SYCE3A1L190 88 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 PFKLP17858 780 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 YWHAQP27348 245 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 APBA1Q02410 837 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 TAF10Q12962 218 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 SGO2Q562F6 1265 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 TXNDC8Q6A555 127 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 GJB7Q6PEY0 223 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 APTXQ7Z2E3 356 aaKnown RBP19.43■□□□□ 0.7
HLA-F-220ENST00000434407 DHX40Q8IX18 779 aaKnown RBP19.43■□□□□ 0.7
HLA-F-220ENST00000434407 AOPEPQ8N6M6 819 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 RSPRY1Q96DX4 576 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 TAB2Q9NYJ8 693 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 TRPM5Q9NZQ8 1165 aa19.43■□□□□ 0.7
HLA-F-220ENST00000434407 ZNF840PA6NDX5 716 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 O00370 1275 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 PRAMEF12O95522 483 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 ZDHHC11BP0C7U3 371 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 VIPR2P41587 438 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 MFAP3P55082 362 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 PKDCCQ504Y2 493 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 SNX30Q5VWJ9 437 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 VITQ6UXI7 678 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 GPRIN1Q7Z2K8 1008 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 TTC30AQ86WT1 665 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 MFSD6LQ8IWD5 586 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 MAB21L3Q8N8X9 362 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 RBBP8NLQ8NC74 664 aaPredicted RBP19.42■□□□□ 0.7
HLA-F-220ENST00000434407 DEPDC1BQ8WUY9 529 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 TFAP2BQ92481 460 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 SHC3Q92529 594 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 SLITRK1Q96PX8 696 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 ZSWIM1Q9BR11 485 aa19.42■□□□□ 0.7
HLA-F-220ENST00000434407 TMEM221A6NGB7 291 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 HEPACAM2A8MVW5 462 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 M0R296 226 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 ZNF165P49910 485 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 KIF11P52732 1056 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 COPB1P53618 953 aaKnown RBP19.41■□□□□ 0.7
HLA-F-220ENST00000434407 GPC5P78333 572 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 ZNF268Q14587 947 aaPredicted RBP19.41■□□□□ 0.7
HLA-F-220ENST00000434407 IQCB1Q15051 598 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 CNGA2Q16280 664 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 LCLAT1Q6UWP7 414 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 BMP8AQ7Z5Y6 402 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 PDZD8Q8NEN9 1154 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 FBXO32Q969P5 355 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 LRRC3BQ96PB8 259 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 VPS16Q9H269 839 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 FBXO44Q9H4M3 255 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 WNT16Q9UBV4 365 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 TSPAN16Q9UKR8 245 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 SCML2Q9UQR0 700 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 USP3Q9Y6I4 520 aa19.41■□□□□ 0.7
HLA-F-220ENST00000434407 COL4A2P08572 1712 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 C2orf78A6NCI8 922 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 SMTNL1A8MU46 457 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 BECN2A8MW95 431 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 OLFM2O95897 454 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 CD19P15391 556 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 PSMC3P17980 439 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 BCAT1P54687 386 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 FCHO2Q0JRZ9 810 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 STILQ15468 1287 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 GOLGA7BQ2TAP0 167 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 ZSCAN23Q3MJ62 389 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 RAB41Q5JT25 222 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 KLHDC7AQ5VTJ3 777 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 USP13Q92995 863 aaPredicted RBP19.4■□□□□ 0.7
HLA-F-220ENST00000434407 SLC22A12Q96S37 553 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 PLCB1Q9NQ66 1216 aa19.4■□□□□ 0.7
HLA-F-220ENST00000434407 AJAP1Q9UKB5 411 aaPredicted RBP19.4■□□□□ 0.7
HLA-F-220ENST00000434407 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.4■□□□□ 0.7
HLA-F-220ENST00000434407 PRR33A8MZF0 331 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 PES1O00541 588 aaKnown RBP19.39■□□□□ 0.69
HLA-F-220ENST00000434407 XPO1O14980 1071 aaKnown RBP19.39■□□□□ 0.69
HLA-F-220ENST00000434407 OAS1P00973 400 aaKnown RBP19.39■□□□□ 0.69
HLA-F-220ENST00000434407 AVPR1AP37288 418 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 BST2Q10589 180 aaKnown RBP19.39■□□□□ 0.69
HLA-F-220ENST00000434407 TMEM31Q5JXX7 168 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 CELF5Q8N6W0 485 aaKnown RBP19.39■□□□□ 0.69
HLA-F-220ENST00000434407 ANKRD20A12PQ8NF67 263 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 CYP2S1Q96SQ9 504 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 TRMT61BQ9BVS5 477 aaKnown RBP19.39■□□□□ 0.69
HLA-F-220ENST00000434407 NAA15Q9BXJ9 866 aaKnown RBP19.39■□□□□ 0.69
HLA-F-220ENST00000434407 KIF9Q9HAQ2 790 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 TRPV5Q9NQA5 729 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 TDP1Q9NUW8 608 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 HESX1Q9UBX0 185 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 DNAJC12Q9UKB3 198 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 CCL26Q9Y258 94 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 TICRRQ7Z2Z1 1910 aa19.39■□□□□ 0.69
HLA-F-220ENST00000434407 TRAV19A0A0A6YYK7 116 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 FAM86C2PA6NEL3 165 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 LGALS16A8MUM7 142 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 ARNTLO00327 626 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 CAVIN2O95810 425 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 TPM2P07951 284 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 USP17L7P0C7H9 530 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms