RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 H3BNC9 293 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 ADAM10O14672 748 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 DSCR3O14972 297 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 TKTP29401 623 aaKnown RBP4.73□□□□□ -1.65
PTPN4-205ENST00000433888 GKP32189 559 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 CCKARP32238 428 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 CTBP1Q13363 440 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 GPR162Q16538 588 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 PTCHD3Q3KNS1 767 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 LEXMQ3ZCV2 418 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 SIRT6Q8N6T7 355 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 TMEM171Q8WVE6 324 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 MTFMTQ96DP5 389 aaKnown RBP4.73□□□□□ -1.65
PTPN4-205ENST00000433888 MMS19Q96T76 1030 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 MAP3K14Q99558 947 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 C17orf80Q9BSJ5 609 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 PCDH12Q9NPG4 1184 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 PIH1D1Q9NWS0 290 aaKnown RBP4.73□□□□□ -1.65
PTPN4-205ENST00000433888 AMFRQ9UKV5 643 aa4.73□□□□□ -1.65
PTPN4-205ENST00000433888 MYMKA6NI61 221 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 TMEM232C9JQI7 657 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 PMPCBO75439 489 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 MT-CO3P00414 261 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 TMEM191BP0C7N4 346 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 NPR1P16066 1061 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 ATF7P17544 494 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-205ENST00000433888 THBS4P35443 961 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 SATB1Q01826 763 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 KRT17Q04695 432 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 SRSF1Q07955 248 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTPN4-205ENST00000433888 ZNF268Q14587 947 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-205ENST00000433888 PLA1AQ53H76 456 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 ZBTB46Q86UZ6 589 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 GRAMD1CQ8IYS0 662 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 LINC01465Q8N7H1 131 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 BPIFB1Q8TDL5 484 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 KBTBD7Q8WVZ9 684 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 IGFBPL1Q8WX77 278 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 MAP4K1Q92918 833 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 PPP2R3CQ969Q6 453 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 CCDC17Q96LX7 622 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 SIGLEC11Q96RL6 698 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 SMURF2Q9HAU4 748 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 GBA2Q9HCG7 927 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-205ENST00000433888 GAR1Q9NY12 217 aaKnown RBP4.72□□□□□ -1.65
PTPN4-205ENST00000433888 TFCP2L1Q9NZI6 479 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 GABBR1Q9UBS5 961 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 STAP2Q9UGK3 403 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 ANKRD6Q9Y2G4 727 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 NOTCH4Q99466 2003 aa4.72□□□□□ -1.65
PTPN4-205ENST00000433888 MYO1CO00159 1063 aa4.71□□□□□ -1.66
PTPN4-205ENST00000433888 GHRHRQ02643 423 aa4.71□□□□□ -1.66
PTPN4-205ENST00000433888 LMAN2Q12907 356 aa4.71□□□□□ -1.66
PTPN4-205ENST00000433888 ZNF267Q14586 743 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-205ENST00000433888 LMBRD2Q68DH5 695 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-205ENST00000433888 KRTAP5-11Q6L8G4 156 aa4.71□□□□□ -1.66
PTPN4-205ENST00000433888 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-205ENST00000433888 DIS3LQ8TF46 1054 aaKnown RBP4.71□□□□□ -1.66
PTPN4-205ENST00000433888 NSMCE1Q8WV22 266 aa4.71□□□□□ -1.66
PTPN4-205ENST00000433888 HOMER2Q9NSB8 354 aa4.71□□□□□ -1.66
PTPN4-205ENST00000433888 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-205ENST00000433888 LPAR3Q9UBY5 353 aa4.71□□□□□ -1.66
PTPN4-205ENST00000433888 COL4A3BPQ9Y5P4 624 aa4.71□□□□□ -1.66
PTPN4-205ENST00000433888 BTN3A1O00481 513 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 CNOT3O75175 753 aaKnown RBP4.7□□□□□ -1.66
PTPN4-205ENST00000433888 ABLIM3O94929 683 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 CBSLP0DN79 551 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 PF4V1P10720 104 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 APEHP13798 732 aaKnown RBP4.7□□□□□ -1.66
PTPN4-205ENST00000433888 CBSP35520 551 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 NEK2P51955 445 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 BCAT1P54687 386 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 SEC23BQ15437 767 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 C4orf46Q504U0 113 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 AWAT1Q58HT5 328 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 DEF8Q6ZN54 512 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 PTCHD4Q6ZW05 846 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 LIX1LQ8IVB5 337 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 NT5C1BQ96P26 610 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 XPNPEP3Q9NQH7 507 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 CNNM1Q9NRU3 951 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 IP6K2Q9UHH9 426 aa4.7□□□□□ -1.66
PTPN4-205ENST00000433888 DRG1Q9Y295 367 aaKnown RBP4.7□□□□□ -1.66
PTPN4-205ENST00000433888 TMEM233B4DJY2 109 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 H3BML4 177 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 M0R3H8 397 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 CES2O00748 559 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 TLR2O60603 784 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 GCATO75600 419 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 OFD1O75665 1012 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 UBXN7O94888 489 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 NCLP19338 710 aaKnown RBP4.69□□□□□ -1.66
PTPN4-205ENST00000433888 HTR1BP28222 390 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 CCNIQ14094 377 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 CERCAMQ5T4B2 595 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 MEPCEQ7L2J0 689 aaKnown RBP4.69□□□□□ -1.66
PTPN4-205ENST00000433888 OSR1Q8TAX0 266 aaPredicted RBP4.69□□□□□ -1.66
PTPN4-205ENST00000433888 MARK4Q96L34 752 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 TRIM5Q9C035 493 aa4.69□□□□□ -1.66
PTPN4-205ENST00000433888 MS4A7Q9GZW8 240 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms