RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 TMEM221A6NGB7 291 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 ANHXE9PGG2 379 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 F8VP50 259 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 RNF225M0QZC1 329 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 M0R296 226 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 PES1O00541 588 aaKnown RBP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 GPR37L1O60883 481 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 MICAL2O94851 1124 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 MBD3O95983 291 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 F11P03951 625 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 POU2F2P09086 479 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 CSH1P0DML2 217 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 CSH2P0DML3 217 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 CD19P15391 556 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 LAMA2P24043 3122 aaKnown RBP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 ERCC5P28715 1186 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 RAD23BP54727 409 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 MAP3K7CLP57077 242 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 APBA1Q02410 837 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 ENPEPQ07075 957 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 SIGLEC14Q08ET2 396 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 CETN1Q12798 172 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 CUL2Q13617 745 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 HTR4Q13639 388 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 ARHGAP15Q53QZ3 475 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 CCDC183Q5T5S1 534 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 PPP1R26Q5T8A7 1209 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 PHLDB3Q6NSJ2 640 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 VSTM1Q6UX27 236 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 C11orf57Q6ZUT1 292 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 DENND5BQ6ZUT9 1274 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 MTSS1LQ765P7 747 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 TMEM150AQ86TG1 271 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 UNC93AQ86WB7 457 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 IRF2BP1Q8IU81 584 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 ARID3BQ8IVW6 561 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 ARHGEF19Q8IW93 802 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 TRIM59Q8IWR1 403 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 UBALD2Q8IYN6 164 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 FUKQ8N0W3 1084 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 PPM1KQ8N3J5 372 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 LEMD2Q8NC56 503 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 DOCK8Q8NF50 2099 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 LMO3Q8TAP4 145 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 KAT5Q92993 513 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 TMEM176AQ96HP8 235 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 FUBP3Q96I24 572 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 CNOT6LQ96LI5 555 aaKnown RBP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 NT5C1BQ96P26 610 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 GCNAQ96QF7 691 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 NT5C1AQ9BXI3 368 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 GPR88Q9GZN0 384 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 NIF3L1Q9GZT8 377 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 CYP3A43Q9HB55 503 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 TRPC7Q9HCX4 862 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 ABCB6Q9NP58 842 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 AVENQ9NQS1 362 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 TMEM30AQ9NV96 361 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 GDE1Q9NZC3 331 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 RAPGEFL1Q9UHV5 662 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 KIF26AQ9ULI4 1882 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 COQ4Q9Y3A0 265 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 PCDHB9Q9Y5E1 797 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 PCDHB4Q9Y5E5 795 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 TRANK1O15050 2925 aa6.12□□□□□ -1.43
HMGB3P24-201ENST00000433260 ANAPC1Q9H1A4 1944 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 COL4A3Q01955 1670 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 REV3LO60673 3130 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 C2orf78A6NCI8 922 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 HEPACAM2A8MVW5 462 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 KCNJ18B7U540 433 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 CILPO75339 1184 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 ECI2O75521 394 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 NOL4O94818 638 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 FGF19O95750 216 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 PSMC3P17980 439 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 HDCP19113 662 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 TRIM21P19474 475 aaKnown RBP6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 CDK11BP21127 795 aaKnown RBP6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 CD72P21854 359 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 VARSP26640 1264 aaKnown RBP6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 YWHAQP27348 245 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 CDC25CP30307 473 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 GDI1P31150 447 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 USP8P40818 1118 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 MAGEA11P43364 429 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 EPHA5P54756 1037 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 MARSP56192 900 aaKnown RBP6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 SH3BP2P78314 561 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 INCA1Q0VD86 236 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 TAF10Q12962 218 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 KCNJ12Q14500 433 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 ARHGAP44Q17R89 818 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 PLA2G2CQ5R387 149 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 GJB7Q6PEY0 223 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 FOXR2Q6PJQ5 311 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 TMEM270Q6UE05 265 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 HFE2Q6ZVN8 426 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 FAM35AQ86V20 835 aa6.11□□□□□ -1.43
HMGB3P24-201ENST00000433260 FAM114A1Q8IWE2 563 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms