RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TBC1D30Q9Y2I9 924 aa4.13□□□□□ -1.75
CLK1-204ENST00000432425 CDY1Q9Y6F8 540 aa4.13□□□□□ -1.75
CLK1-204ENST00000432425 LOC102723971A0A1B0GUV8 181 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 A6NNZ2 444 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 VSTM5A8MXK1 200 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 TISP43B9A030 160 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 INO80B-WBP1J3KQ70 363 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 AP4M1O00189 453 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 CCP110O43303 1012 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 EXOC3O60645 756 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 SRGAP2O75044 1071 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 PDE8BO95263 885 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 CYP2D6P10635 497 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 SUMO2P61956 95 aaKnown RBP4.12□□□□□ -1.75
CLK1-204ENST00000432425 POLD3Q15054 466 aaPredicted RBP4.12□□□□□ -1.75
CLK1-204ENST00000432425 KIAA0753Q2KHM9 967 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 GFOD2Q3B7J2 385 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 ZDHHC24Q6UX98 284 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 MICU3Q86XE3 530 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 SIRT6Q8N6T7 355 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 PNLDC1Q8NA58 520 aaKnown RBP4.12□□□□□ -1.75
CLK1-204ENST00000432425 FAM156AQ8NDB6 213 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 SMG7Q92540 1137 aaKnown RBP4.12□□□□□ -1.75
CLK1-204ENST00000432425 NMD3Q96D46 503 aaKnown RBP4.12□□□□□ -1.75
CLK1-204ENST00000432425 LENG8Q96PV6 779 aaPredicted RBP4.12□□□□□ -1.75
CLK1-204ENST00000432425 INO80BQ9C086 356 aaPredicted RBP4.12□□□□□ -1.75
CLK1-204ENST00000432425 ZNF287Q9HBT7 754 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 NRIP3Q9NQ35 241 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 XPNPEP3Q9NQH7 507 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 TFCP2L1Q9NZI6 479 aa4.12□□□□□ -1.75
CLK1-204ENST00000432425 PRRT4C9JH25 899 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 H7C1Q1 480 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 GOLIM4O00461 696 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 MAP4K4O95819 1239 aaPredicted RBP4.11□□□□□ -1.75
CLK1-204ENST00000432425 LATS1O95835 1130 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 ZBED1O96006 694 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 NHLRC4P0CG21 123 aaPredicted RBP4.11□□□□□ -1.75
CLK1-204ENST00000432425 EPHA3P29320 983 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 EPHB2P29323 1055 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 MPGP29372 298 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 BCAT1P54687 386 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 FAM193AP78312 1265 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 CYP1B1Q16678 543 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 CERKLQ49MI3 558 aaPredicted RBP4.11□□□□□ -1.75
CLK1-204ENST00000432425 C3orf38Q5JPI3 329 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 KIRREL2Q6UWL6 708 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 SERPINA13PQ6UXR4 307 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 RAB11FIP4Q86YS3 637 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 TERB1Q8NA31 727 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 SMCR8Q8TEV9 937 aaPredicted RBP4.11□□□□□ -1.75
CLK1-204ENST00000432425 RSPRY1Q96DX4 576 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 ASB2Q96Q27 587 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 PRR25Q96S07 402 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 THAP7Q9BT49 309 aaPredicted RBP4.11□□□□□ -1.75
CLK1-204ENST00000432425 CIPCQ9C0C6 399 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 RNF7Q9UBF6 113 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 USP22Q9UPT9 525 aa4.11□□□□□ -1.75
CLK1-204ENST00000432425 DRG1Q9Y295 367 aaKnown RBP4.11□□□□□ -1.75
CLK1-204ENST00000432425 FRMPD2Q68DX3 1309 aaPredicted RBP4.11□□□□□ -1.75
CLK1-204ENST00000432425 WDR91A4D1P6 747 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 POC1B-GALNT4F8VUJ3 575 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 UBE2Q2LH0YL09 131 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 H7C4K7 107 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 CES2O00748 559 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 TPP1O14773 563 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 PRR35P0CG20 571 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 MYCLP12524 364 aaPredicted RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 MYF5P13349 255 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 PTDSS1P48651 473 aaKnown RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 ZNF81P51508 661 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 RPS16P62249 146 aaKnown RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 ARHGEF7Q14155 803 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 SLC29A2Q14542 456 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 GBX1Q14549 363 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 GRM3Q14832 879 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 MTX3Q5HYI7 312 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 DENND2CQ68D51 928 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 ZNF66Q6ZN08 573 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 CHSY1Q86X52 802 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 GALNT4Q8N4A0 578 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 APIPQ96GX9 242 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 SNX18Q96RF0 628 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 PRDM11Q9NQV5 511 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 AMFRQ9UKV5 643 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 ZNF804BA4D1E1 1349 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 PPP6CO00743 305 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 CD3EAPO15446 510 aaKnown RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 RRP9O43818 475 aaKnown RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 PMPCBO75439 489 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 PIAS2O75928 621 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 USP1O94782 785 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 HRGP04196 525 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 TUBB4AP04350 444 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 ATF3P18847 181 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 KELP23276 732 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 FPR3P25089 353 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 ACVR2AP27037 513 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 PEX2P28328 305 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 GKP32189 559 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 RENBPP51606 427 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms