RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SRGAP2O75044 1071 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 COQ9O75208 318 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 ACTL6BO94805 426 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 CKMT1AP12532 417 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 UQCRC1P31930 480 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 ADD2P35612 726 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 SELENOPP49908 381 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 PDE6CP51160 858 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 ATXN1P54253 815 aaKnown RBP3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 SLC25A3Q00325 362 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 KRT17Q04695 432 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 TUBB3Q13509 450 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 CCNIQ14094 377 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 E2F2Q14209 437 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 CLCA4Q14CN2 919 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 TAF5Q15542 800 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM110CQ1W6H9 321 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 CD300EQ496F6 205 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 RBM20Q5T481 1227 aaKnown RBP3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 INTS11Q5TA45 600 aaKnown RBP3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 ARHGAP40Q5TG30 622 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 CACHD1Q5VU97 1274 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 ICE2Q659A1 982 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 RGS7BPQ6MZT1 257 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 CCDC70Q6NSX1 233 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 LAYNQ6UX15 382 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 RHOUQ7L0Q8 258 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 DTX2Q86UW9 622 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 CPOQ8IVL8 374 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 SLC15A3Q8IY34 581 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 ABRAQ8N0Z2 381 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 SNX19Q92543 992 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 USP13Q92995 863 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 PAAF1Q9BRP4 392 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 RTKNQ9BST9 563 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 GBA2Q9HCG7 927 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 AKIP1Q9NQ31 210 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 TRIM36Q9NQ86 728 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 RRN3Q9NYV6 651 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 TRPM5Q9NZQ8 1165 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 EIF2B4Q9UI10 523 aaKnown RBP3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 FEM1BQ9UK73 627 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 RIMKLBQ9ULI2 386 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 SORCS3Q9UPU3 1222 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 TESMINQ9Y4I5 508 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 SNX14Q9Y5W7 946 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 WDR27A2RRH5 827 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 TISP43B9A030 160 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 PRRT4C9JH25 899 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 EIF3FO00303 357 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 RNASET2O00584 256 aaKnown RBP3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 DNPH1O43598 174 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 TRIAP1O43715 76 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 TAF5LO75529 589 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 WDHD1O75717 1129 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 NCR1O76036 304 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 RECQL4O94761 1208 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 SCAF4O95104 1147 aaKnown RBP3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 RASAL1O95294 804 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 VIPP01282 170 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 HGFP14210 728 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 ADORA2AP29274 412 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 CD6P30203 668 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 ZEB1P37275 1124 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 HNRNPMP52272 730 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 SEC24CP53992 1094 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 TIRAPP58753 221 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 AP2B1P63010 937 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 SATB1Q01826 763 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 SP2Q02086 613 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 GPS1Q13098 491 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 MTAPQ13126 283 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 GRM1Q13255 1194 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 FZD5Q13467 585 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 CNGB1Q14028 1251 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 GRM4Q14833 912 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 ACOX1Q15067 660 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 NRN1LQ496H8 165 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 FOXR2Q6PJQ5 311 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 LRRTM4Q86VH4 590 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 TMTC1Q8IUR5 882 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 RASGRP3Q8IV61 690 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 IL17DQ8TAD2 202 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 ATG4AQ8WYN0 398 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 RILPL2Q969X0 211 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM136AQ96C01 138 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 RSPRY1Q96DX4 576 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 MYEOVQ96EZ4 313 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 PPM1MQ96MI6 270 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 NAP1L4Q99733 375 aaKnown RBP3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 PAGR1Q9BTK6 254 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 VN1R3Q9BXE9 311 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 KLC2Q9H0B6 622 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 ZCCHC4Q9H5U6 513 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 GALNT9Q9HCQ5 603 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 SAYSD1Q9NPB0 183 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 G6PC2Q9NQR9 355 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 RASSF1Q9NS23 344 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 INTS13Q9NVM9 706 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 GGA3Q9NZ52 723 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms