RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 POMCP01189 267 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 PLA2G1BP04054 148 aaKnown RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 ITGA2BP08514 1039 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 SBK3P0C264 359 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 PIM1P11309 404 aaPredicted RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 EGR1P18146 543 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 ACVR2AP27037 513 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 HOXC9P31274 260 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 CASRP41180 1078 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 RXRGP48443 463 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 EPHB3P54753 998 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 CLRN1P58418 232 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 DLX2Q07687 328 aaPredicted RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 MAPKAPK3Q16644 382 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 INSCQ1MX18 579 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 SLC5A9Q2M3M2 681 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 ADCK5Q3MIX3 580 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 RINLQ6ZS11 566 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 RALYLQ86SE5 291 aaKnown RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 GAS2L3Q86XJ1 694 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 FBXO15Q8NCQ5 510 aaPredicted RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 DNERQ8NFT8 737 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 OR56A3Q8NH54 315 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 SLC30A5Q8TAD4 765 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 OTUD7AQ8TE49 926 aaPredicted RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 STON2Q8WXE9 905 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 FAM168AQ92567 244 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 SDCCAG3Q96C92 435 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 C18orf8Q96DM3 657 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 CEP95Q96GE4 821 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 PPP1R9BQ96SB3 815 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 CNPPD1Q9BV87 410 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 CPEB1Q9BZB8 566 aaKnown RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 TINAGL1Q9GZM7 467 aaPredicted RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 NSUN3Q9H649 340 aaKnown RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 GCM1Q9NP62 436 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 SLAMF7Q9NQ25 335 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 WASH6PQ9NQA3 447 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 HERC5Q9UII4 1024 aaKnown RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 FBXO2Q9UK22 296 aaPredicted RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 ITGB1BP2Q9UKP3 347 aa4.69□□□□□ -1.66
HMGB3-203ENST00000430118 ABT1Q9ULW3 272 aaKnown RBP4.69□□□□□ -1.66
HMGB3-203ENST00000430118 ROCK2O75116 1388 aaKnown RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 KIF24Q5T7B8 1368 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 ZNF831Q5JPB2 1677 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 LOC102723971A0A1B0GUV8 181 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 AQP7P3A6NL99 342 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 EIF3FO00303 357 aaPredicted RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 KIAA0391O15091 583 aaKnown RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 FAM155BO75949 473 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 CYP1A1P04798 512 aaPredicted RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 BTF3P20290 206 aaKnown RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 CST5P28325 142 aaPredicted RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 SLC5A2P31639 672 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 LIMS1P48059 325 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 PAPOLAP51003 745 aaKnown RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 ATP2C1P98194 919 aaPredicted RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 SATB1Q01826 763 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 TLE2Q04725 743 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 SLC29A2Q14542 456 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 BMT2Q1RMZ1 405 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 DEFB115Q30KQ5 88 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 METTL24Q5JXM2 366 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 DCAF12L1Q5VU92 463 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 FAM160B1Q5W0V3 765 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 RETSATQ6NUM9 610 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 ZNF529Q6P280 563 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 KIAA0408Q6ZU52 694 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 RSRC2Q7L4I2 434 aaKnown RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 PPP1R32Q7Z5V6 425 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 ADGRE4PQ86SQ3 457 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 USP37Q86T82 979 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 SIAH1Q8IUQ4 282 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 SLC15A4Q8N697 577 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 GLIS1Q8NBF1 620 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 ZFP28Q8NHY6 868 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 THAP4Q8WY91 577 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 RBM15Q96T37 977 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 GPHA2Q96T91 129 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 SEC62Q99442 399 aaKnown RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 PYM1Q9BRP8 204 aaKnown RBP4.68□□□□□ -1.66
HMGB3-203ENST00000430118 STK31Q9BXU1 1019 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 ZCWPW1Q9H0M4 648 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 ITM2CQ9NQX7 267 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 ZSCAN32Q9NX65 697 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 XPR1Q9UBH6 696 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 IRAK3Q9Y616 596 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 THSD7BQ9C0I4 1608 aa4.68□□□□□ -1.66
HMGB3-203ENST00000430118 FLT4P35916 1363 aa4.67□□□□□ -1.66
HMGB3-203ENST00000430118 RAB3GAP2Q9H2M9 1393 aa4.67□□□□□ -1.66
HMGB3-203ENST00000430118 CCDC196A0A1B0GTZ2 297 aa4.67□□□□□ -1.66
HMGB3-203ENST00000430118 RRN3P2A6NIE6 340 aa4.67□□□□□ -1.66
HMGB3-203ENST00000430118 TBKBP1A7MCY6 615 aa4.67□□□□□ -1.66
HMGB3-203ENST00000430118 ZNF785A8K8V0 405 aa4.67□□□□□ -1.66
HMGB3-203ENST00000430118 IPO5O00410 1097 aaKnown RBP4.67□□□□□ -1.66
HMGB3-203ENST00000430118 WNT10BO00744 389 aa4.67□□□□□ -1.66
HMGB3-203ENST00000430118 RASSF9O75901 435 aa4.67□□□□□ -1.66
HMGB3-203ENST00000430118 NDST3O95803 873 aa4.67□□□□□ -1.66
HMGB3-203ENST00000430118 ZNF888P0CJ79 500 aaPredicted RBP4.67□□□□□ -1.66
HMGB3-203ENST00000430118 GYS1P13807 737 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms