RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.64■□□□□ 0.41
VARS-216ENST00000428445 LNP1A1A4G5 178 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 PTPN1P18031 435 aaKnown RBP17.64■□□□□ 0.41
VARS-216ENST00000428445 DHCR24Q15392 516 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 E2F4Q16254 413 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 USP39Q53GS9 565 aaKnown RBP17.64■□□□□ 0.41
VARS-216ENST00000428445 RHBDF2Q6PJF5 856 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 WDR49Q8IV35 697 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 ALLCQ8N6M5 410 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 ZNF507Q8TCN5 953 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 DHX58Q96C10 678 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 TTLL2Q9BWV7 592 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 B3GNT5Q9BYG0 378 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 GZF1Q9H116 711 aaPredicted RBP17.64■□□□□ 0.41
VARS-216ENST00000428445 CFAP97Q9P2B7 532 aa17.64■□□□□ 0.41
VARS-216ENST00000428445 NXF1Q9UBU9 619 aaKnown RBP17.64■□□□□ 0.41
VARS-216ENST00000428445 CHORDC1Q9UHD1 332 aaPredicted RBP17.64■□□□□ 0.41
VARS-216ENST00000428445 CIZ1Q9ULV3 898 aaPredicted RBP17.64■□□□□ 0.41
VARS-216ENST00000428445 SGK1O00141 431 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 KLF8O95600 359 aaPredicted RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 TOP3BO95985 862 aaKnown RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 MBL2P11226 248 aaPredicted RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 SPINK2P20155 84 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 DHPSP49366 369 aaPredicted RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 CASP4P49662 377 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 CDH8P55286 799 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 MYL6P60660 151 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 ASIC1P78348 528 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 IRX4P78413 519 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 SLC7A9P82251 487 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 KDSRQ06136 332 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 STK38Q15208 465 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 SURF1Q15526 300 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 MAPRE1Q15691 268 aaKnown RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 CRY1Q16526 586 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 SNRNP35Q16560 246 aaKnown RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 WDR72Q3MJ13 1102 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 FOXD4L5Q5VV16 416 aaPredicted RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 PMS2CLQ68D20 193 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 EPM2AIP1Q7L775 607 aaPredicted RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 RASSF3Q86WH2 238 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 TXNDC5Q8NBS9 432 aaKnown RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 LINC00301Q8NCQ3 95 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 FOXD4L4Q8WXT5 416 aaPredicted RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 WBP2Q969T9 261 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 INTS4Q96HW7 963 aaKnown RBP17.63■□□□□ 0.41
VARS-216ENST00000428445 KCNK16Q96T55 309 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 TRIM9Q9C026 710 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 AGPAT3Q9NRZ7 376 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 KBTBD4Q9NVX7 518 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 MMP17Q9ULZ9 603 aa17.63■□□□□ 0.41
VARS-216ENST00000428445 TRIM66O15016 1216 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 KIAA0391O15091 583 aaKnown RBP17.62■□□□□ 0.41
VARS-216ENST00000428445 OAS1P00973 400 aaKnown RBP17.62■□□□□ 0.41
VARS-216ENST00000428445 CHRM1P11229 460 aaPredicted RBP17.62■□□□□ 0.41
VARS-216ENST00000428445 NOVA1P51513 510 aaKnown RBP17.62■□□□□ 0.41
VARS-216ENST00000428445 NOP14P78316 857 aaKnown RBP17.62■□□□□ 0.41
VARS-216ENST00000428445 CYP24A1Q07973 514 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 TDRD10Q5VZ19 366 aaKnown RBP17.62■□□□□ 0.41
VARS-216ENST00000428445 ARMCX6Q7L4S7 300 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 NAT16Q8N8M0 369 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 SCAMP5Q8TAC9 235 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 SCFD1Q8WVM8 642 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 PIGKQ92643 395 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 ERLEC1Q96DZ1 483 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 C8orf48Q96LL4 319 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 CGRRF1Q99675 332 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 BLZF1Q9H2G9 400 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 TNMDQ9H2S6 317 aa17.62■□□□□ 0.41
VARS-216ENST00000428445 ZSCAN16Q9H4T2 348 aaPredicted RBP17.62■□□□□ 0.41
VARS-216ENST00000428445 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 A8MXQ7 604 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 CDX4O14627 284 aaPredicted RBP17.61■□□□□ 0.41
VARS-216ENST00000428445 TACC1O75410 805 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 OLFM2O95897 454 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 NASPP49321 788 aaPredicted RBP17.61■□□□□ 0.41
VARS-216ENST00000428445 TNNC1P63316 161 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 PSMD6Q15008 389 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 FOXD4L6Q3SYB3 417 aaPredicted RBP17.61■□□□□ 0.41
VARS-216ENST00000428445 FAM26FQ5R3K3 315 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 SHC4Q6S5L8 630 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 FOXD4L3Q6VB84 417 aaPredicted RBP17.61■□□□□ 0.41
VARS-216ENST00000428445 STXBP4Q6ZWJ1 553 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 TMEFF1Q8IYR6 380 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 DEFB119Q8N690 84 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 IL17RCQ8NAC3 791 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 PLEKHO2Q8TD55 490 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 CNOT6LQ96LI5 555 aaKnown RBP17.61■□□□□ 0.41
VARS-216ENST00000428445 FNBP1Q96RU3 617 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 PNKPQ96T60 521 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 LRRC27Q9C0I9 530 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 SMYD3Q9H7B4 428 aa17.61■□□□□ 0.41
VARS-216ENST00000428445 C1QTNF9BB2RNN3 333 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 KHNYNO15037 678 aaKnown RBP17.6■□□□□ 0.41
VARS-216ENST00000428445 TRIM24O15164 1050 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 SPTLC2O15270 562 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 COCHO43405 550 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 STX6O43752 255 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 ADAM23O75077 832 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 KAT7O95251 611 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms