RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TPTE2Q6XPS3 522 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 CATSPER3Q86XQ3 398 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 KATNAL2Q8IYT4 538 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 COA7Q96BR5 231 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 EFHD2Q96C19 240 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-206ENST00000428313 LRGUKQ96M69 825 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 RILPQ96NA2 401 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 UNKQ9C0B0 810 aaKnown RBP16.74■□□□□ 0.27
C9orf3-206ENST00000428313 FHDC1Q9C0D6 1143 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-206ENST00000428313 LIN28AQ9H9Z2 209 aaKnown RBP16.74■□□□□ 0.27
C9orf3-206ENST00000428313 NHSQ6T4R5 1651 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 COL24A1Q17RW2 1714 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 MYOCOSA0A1B0GUC4 107 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 CYP2C9P11712 490 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 ZBTB17Q13105 803 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 GK3PQ14409 553 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 PSMD6Q15008 389 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 SLFN12Q8IYM2 578 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 USP6NLQ92738 828 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 E2F7Q96AV8 911 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 PLEKHA8Q96JA3 519 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 KCNK16Q96T55 309 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 DRC3Q9H069 523 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 TPK1Q9H3S4 243 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 AVENQ9NQS1 362 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-206ENST00000428313 GIN1Q9NXP7 522 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 GNPTGQ9UJJ9 305 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 CCPG1Q9ULG6 757 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 K7EPI3 171 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 TFPTP0C1Z6 253 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 RPA1P27694 616 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 EIF2B2P49770 351 aaKnown RBP16.73■□□□□ 0.27
C9orf3-206ENST00000428313 PSMC6P62333 389 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 TMPRSS15P98073 1019 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 ZFP1Q6P2D0 407 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 ISLR2Q6UXK2 745 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 PCGF5Q86SE9 256 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 ANKMY2Q8IV38 441 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 CCDC124Q96CT7 223 aaKnown RBP16.73■□□□□ 0.27
C9orf3-206ENST00000428313 SERAC1Q96JX3 654 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 FAM118BQ9BPY3 351 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 GBA3Q9H227 469 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 CCDC68Q9H2F9 335 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 SIRPGQ9P1W8 387 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 CNOT11Q9UKZ1 510 aaKnown RBP16.73■□□□□ 0.27
C9orf3-206ENST00000428313 DRG1Q9Y295 367 aaKnown RBP16.73■□□□□ 0.27
C9orf3-206ENST00000428313 RABGAP1Q9Y3P9 1069 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 SLIT2O94813 1529 aa16.73■□□□□ 0.27
C9orf3-206ENST00000428313 TNRC6CQ9HCJ0 1690 aaKnown RBP16.73■□□□□ 0.27
C9orf3-206ENST00000428313 FBXO21O94952 628 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-206ENST00000428313 GYS1P13807 737 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 SSTR1P30872 391 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 C21orf59P57076 290 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 EPC2Q52LR7 807 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 RSPH3Q86UC2 560 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 SEPT12Q8IYM1 358 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 GLIS1Q8NBF1 620 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 HIPK4Q8NE63 616 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 EXD1Q8NHP7 514 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 TRNAU1APQ9NX07 287 aaKnown RBP16.72■□□□□ 0.27
C9orf3-206ENST00000428313 HERC5Q9UII4 1024 aaKnown RBP16.72■□□□□ 0.27
C9orf3-206ENST00000428313 ZNF536O15090 1300 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 ITGB4P16144 1822 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 XPOTO43592 962 aaKnown RBP16.72■□□□□ 0.27
C9orf3-206ENST00000428313 SNNO75324 88 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-206ENST00000428313 BMP10O95393 424 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 PROCP04070 461 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 SLC5A3P53794 718 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 ARPC4P59998 168 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 MTMR2Q13614 643 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 SLC9A9Q8IVB4 645 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 CHERPQ8IWX8 916 aaKnown RBP16.72■□□□□ 0.27
C9orf3-206ENST00000428313 RHOT1Q8IXI2 618 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 PAIP1Q9H074 479 aaKnown RBP16.72■□□□□ 0.27
C9orf3-206ENST00000428313 AGPAT3Q9NRZ7 376 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 RIMS3Q9UJD0 308 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 NAV1Q8NEY1 1877 aa16.72■□□□□ 0.27
C9orf3-206ENST00000428313 E7ESA3 106 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 COPEO14579 308 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 NDUFB5O43674 189 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 SORBS2O94875 1100 aaKnown RBP16.71■□□□□ 0.27
C9orf3-206ENST00000428313 PSMC3P17980 439 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 STAT3P40763 770 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 PTK7Q13308 1070 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 CAMK2BQ13554 666 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 UBE2SQ16763 222 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 C6orf52Q5T4I8 152 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 GPR180Q86V85 440 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 HPS6Q86YV9 775 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 TMIGD2Q96BF3 282 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 MBOAT7Q96N66 472 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 NYXQ9GZU5 481 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 PCDH9Q9HC56 1237 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 A0A0B4J269 797 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 H0YJX3 145 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 TRPA1O75762 1119 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 H6PDO95479 791 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 ZSCAN5DPP0CG00 497 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms