RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 RPL10AP62906 217 aaKnown RBP13.57□□□□□ -0.24
SGCE-203ENST00000425444 CYP27A1Q02318 531 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 CREB5Q02930 508 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 KCNB1Q14721 858 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 MAPRE1Q15691 268 aaKnown RBP13.57□□□□□ -0.24
SGCE-203ENST00000425444 DDR2Q16832 855 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 CCDC142Q17RM4 750 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 ZNF699Q32M78 642 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 SDHAF4Q5VUM1 108 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 TDRD10Q5VZ19 366 aaKnown RBP13.57□□□□□ -0.24
SGCE-203ENST00000425444 GAREM2Q75VX8 874 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 PDZD3Q86UT5 571 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 SCN4BQ8IWT1 228 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 STKLD1Q8NE28 680 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 OR6B3Q8NGW1 331 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 TTC8Q8TAM2 541 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 PLEKHO2Q8TD55 490 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 PARD3BQ8TEW8 1205 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 ZNF516Q92618 1163 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 MYLPFQ96A32 169 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 E2F7Q96AV8 911 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 FUBP3Q96I24 572 aaKnown RBP eCLIP13.57□□□□□ -0.24
SGCE-203ENST00000425444 PKMYT1Q99640 499 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 GZF1Q9H116 711 aaPredicted RBP13.57□□□□□ -0.24
SGCE-203ENST00000425444 TRPV4Q9HBA0 871 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 RMND1Q9NWS8 449 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 MSRB2Q9Y3D2 182 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 ABCA7Q8IZY2 2146 aa13.57□□□□□ -0.24
SGCE-203ENST00000425444 CCDC163A0A0D9SF12 145 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 LNP1A1A4G5 178 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 A8MXQ7 604 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 SPECC1L-ADORA2AF8WAN1 911 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 ATP2C2O75185 946 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 AKAP3O75969 853 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
SGCE-203ENST00000425444 LMO2P25791 158 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 GNL1P36915 607 aaPredicted RBP13.56□□□□□ -0.24
SGCE-203ENST00000425444 PNOCQ13519 176 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 NCOA4Q13772 614 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 CCINQ13939 588 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 PON2Q15165 354 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 PLK5Q496M5 336 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 CFAP221Q4G0U5 840 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 SCARA5Q6ZMJ2 495 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 LIMS2Q7Z4I7 341 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 ARID3BQ8IVW6 561 aaPredicted RBP13.56□□□□□ -0.24
SGCE-203ENST00000425444 FMR1NBQ8N0W7 255 aaPredicted RBP13.56□□□□□ -0.24
SGCE-203ENST00000425444 SYNPOQ8N3V7 929 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 GUF1Q8N442 669 aaKnown RBP13.56□□□□□ -0.24
SGCE-203ENST00000425444 DEFB124Q8NES8 71 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 MRPL45Q9BRJ2 306 aaKnown RBP13.56□□□□□ -0.24
SGCE-203ENST00000425444 TASP1Q9H6P5 420 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 TMEM9BQ9NQ34 198 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 MAGEC2Q9UBF1 373 aaPredicted RBP13.56□□□□□ -0.24
SGCE-203ENST00000425444 UXTQ9UBK9 157 aaPredicted RBP13.56□□□□□ -0.24
SGCE-203ENST00000425444 KLK13Q9UKR3 277 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 TRAF3IP3Q9Y228 551 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 GPSM3Q9Y4H4 160 aa13.56□□□□□ -0.24
SGCE-203ENST00000425444 SPTA1P02549 2419 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 ZNF462Q96JM2 2506 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 EML5Q05BV3 1969 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 CHADO15335 359 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 TACC1O75410 805 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 KRT13P13646 458 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 HMGA1P17096 107 aaKnown RBP13.55□□□□□ -0.24
SGCE-203ENST00000425444 ANXA13P27216 316 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 CTHP32929 405 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 DLG4P78352 724 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 FAM160A1Q05DH4 1040 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 ELF2Q15723 593 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 UAP1L1Q3KQV9 507 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 ZNF667Q5HYK9 610 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 MDH1BQ5I0G3 518 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 FAM171BQ6P995 826 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 RALGPS2Q86X27 583 aaPredicted RBP13.55□□□□□ -0.24
SGCE-203ENST00000425444 GPIHBP1Q8IV16 184 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 TMEM174Q8WUU8 243 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
SGCE-203ENST00000425444 XYLT2Q9H1B5 865 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 IL21Q9HBE4 155 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 CRTAC1Q9NQ79 661 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 HOOK1Q9UJC3 728 aaKnown RBP13.55□□□□□ -0.24
SGCE-203ENST00000425444 SLC8A2Q9UPR5 921 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 NUP205Q92621 2012 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 NCANO14594 1321 aa13.55□□□□□ -0.24
SGCE-203ENST00000425444 BCLAF3A2AJT9 711 aaKnown RBP13.54□□□□□ -0.24
SGCE-203ENST00000425444 NOL4O94818 638 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 RHOBTB1O94844 696 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 SMC2O95347 1197 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 C4BPAP04003 597 aaKnown RBP13.54□□□□□ -0.24
SGCE-203ENST00000425444 P4HA1P13674 534 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 BDNFP23560 247 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 RPL13P26373 211 aaKnown RBP13.54□□□□□ -0.24
SGCE-203ENST00000425444 AVPR1AP37288 418 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 GRIK1P39086 918 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 PIK3CAP42336 1068 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 VAMP7P51809 220 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 NLRP12P59046 1061 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 CLDN10P78369 228 aa13.54□□□□□ -0.24
SGCE-203ENST00000425444 NFIL3Q16649 462 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms