RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 HNRNPH1P31943 449 aaKnown RBP12.11□□□□□ -0.47
UBR4-207ENST00000425413 STX2P32856 288 aa12.11□□□□□ -0.47
UBR4-207ENST00000425413 CCL14Q16627 93 aa12.11□□□□□ -0.47
UBR4-207ENST00000425413 CA9Q16790 459 aa12.11□□□□□ -0.47
UBR4-207ENST00000425413 TMEM40Q8WWA1 233 aa12.11□□□□□ -0.47
UBR4-207ENST00000425413 CPT1BQ92523 772 aa12.11□□□□□ -0.47
UBR4-207ENST00000425413 NDRG1Q92597 394 aaKnown RBP12.11□□□□□ -0.47
UBR4-207ENST00000425413 PRCCQ92733 491 aaPredicted RBP12.11□□□□□ -0.47
UBR4-207ENST00000425413 CENPTQ96BT3 561 aa12.11□□□□□ -0.47
UBR4-207ENST00000425413 KLF6Q99612 283 aaPredicted RBP12.11□□□□□ -0.47
UBR4-207ENST00000425413 ABHD16BQ9H3Z7 469 aa12.11□□□□□ -0.47
UBR4-207ENST00000425413 WDR35Q9P2L0 1181 aa12.11□□□□□ -0.47
UBR4-207ENST00000425413 MCF2LO15068 1137 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 TMEM63AO94886 807 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 LCP1P13796 627 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 LMO2P25791 158 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
UBR4-207ENST00000425413 FAM133BQ5BKY9 247 aaKnown RBP12.1□□□□□ -0.47
UBR4-207ENST00000425413 CENPUQ71F23 418 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 SPATS2Q86XZ4 545 aaKnown RBP12.1□□□□□ -0.47
UBR4-207ENST00000425413 FAM172AQ8WUF8 416 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 GCOM2Q9BZD3 368 aaPredicted RBP12.1□□□□□ -0.47
UBR4-207ENST00000425413 DRG1Q9Y295 367 aaKnown RBP12.1□□□□□ -0.47
UBR4-207ENST00000425413 C2CD2Q9Y426 696 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 SYNJ2BP-COX16A0A087WUM0 186 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 C5orf60A6NFR6 353 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 C2CD4BA6NLJ0 364 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 GOLGA8RI6L899 631 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 AVILO75366 819 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 GRM5P41594 1212 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 ZNF143P52747 638 aaPredicted RBP12.1□□□□□ -0.47
UBR4-207ENST00000425413 STAT4Q14765 748 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 MORF4L2Q15014 288 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 ICE2Q659A1 982 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 LCLAT1Q6UWP7 414 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 PYROXD1Q8WU10 500 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 SPOCK2Q92563 424 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 CNPY3Q9BT09 278 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 C12orf65Q9H3J6 166 aaKnown RBP12.1□□□□□ -0.47
UBR4-207ENST00000425413 GBA2Q9HCG7 927 aaPredicted RBP12.1□□□□□ -0.47
UBR4-207ENST00000425413 NKIRAS1Q9NYS0 192 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 COX16Q9P0S2 106 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 CHMP2BQ9UQN3 213 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 NR2E3Q9Y5X4 410 aa12.1□□□□□ -0.47
UBR4-207ENST00000425413 A0A1W2PPM1 405 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 SRRM3A6NNA2 597 aaPredicted RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 MYL3P08590 195 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 CYP2B6P20813 491 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 IGFBP6P24592 240 aaPredicted RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 GCAP28676 217 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 ATP5DP30049 168 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 RABGGTBP53611 331 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 POU5F1BQ06416 359 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 CCDC14Q49A88 953 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 SLC27A1Q6PCB7 646 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 DRICH1Q6PGQ1 229 aaPredicted RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 CCHCR1Q8TD31 782 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 ADAMTS10Q9H324 1103 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 FLRT1Q9NZU1 646 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 HESX1Q9UBX0 185 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 XPO7Q9UIA9 1087 aaKnown RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 SCN1AP35498 2009 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 IQCA1LA6NCM1 817 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 TREHO43280 583 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 GABBR2O75899 941 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 INCA1Q0VD86 236 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 GRB14Q14449 540 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 OLFML2BQ68BL8 750 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 CMASQ8NFW8 434 aaPredicted RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 FNIP1Q8TF40 1166 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 P3H4Q92791 437 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 TGS1Q96RS0 853 aaKnown RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 ANK1P16157 1881 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 KAT6AQ92794 2004 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 RBM47A0AV96 593 aaKnown RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 SPTLC1O15269 473 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 PAPSS1O43252 624 aaPredicted RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 GPR32O75388 356 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 GPX6P59796 221 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 SOWAHAQ2M3V2 549 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 C3orf62Q6ZUJ4 267 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 CYP4V2Q6ZWL3 525 aaPredicted RBP12.09□□□□□ -0.47
UBR4-207ENST00000425413 FBXO36Q8NEA4 188 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 TRABDQ9H4I3 376 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 ABCF3Q9NUQ8 709 aa12.09□□□□□ -0.47
UBR4-207ENST00000425413 CLUHO75153 1309 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 APOC4-APOC2K7ER74 178 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 APOC2P02655 101 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 FGFR1P11362 822 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 SDC4P31431 198 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 GABRB2P47870 512 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 ROR1Q01973 937 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 DPYSL3Q14195 570 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 ANKRD20A8PQ5CZ79 823 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 TLK2Q86UE8 772 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 PALM2Q8IXS6 379 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 PPIL6Q8IXY8 311 aa12.08□□□□□ -0.48
UBR4-207ENST00000425413 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms