RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 GTF2H1P32780 548 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 PDE6CP51160 858 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 CCR3P51677 355 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 INCA1Q0VD86 236 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 Q6ZS52 159 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 C12orf29Q8N999 325 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 SUMF1Q8NBK3 374 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 SMARCD1Q96GM5 515 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 SLITRK1Q96PX8 696 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 FAM126AQ9BYI3 521 aaPredicted RBP22.86■■□□□ 1.25
CDCP1-202ENST00000425231 IMPG2Q9BZV3 1241 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 MMRN2Q9H8L6 949 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 DUS2Q9NX74 493 aaKnown RBP22.86■■□□□ 1.25
CDCP1-202ENST00000425231 IL37Q9NZH6 218 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 WNT6Q9Y6F9 365 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 ATP8B3O60423 1300 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 TRDMT1O14717 391 aaKnown RBP22.85■■□□□ 1.25
CDCP1-202ENST00000425231 CETN3O15182 167 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 RTN3O95197 1032 aaPredicted RBP22.85■■□□□ 1.25
CDCP1-202ENST00000425231 SMC2O95347 1197 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 OAS1P00973 400 aaKnown RBP22.85■■□□□ 1.25
CDCP1-202ENST00000425231 CCDC130P13994 396 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 YWHAQP27348 245 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 CXCL12P48061 93 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 PMS1P54277 932 aaKnown RBP22.85■■□□□ 1.25
CDCP1-202ENST00000425231 SLC7A9P82251 487 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 SATB1Q01826 763 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 IFRD2Q12894 506 aaPredicted RBP22.85■■□□□ 1.25
CDCP1-202ENST00000425231 TMEM196Q5HYL7 178 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 KRT39Q6A163 491 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 ELOA2Q8IYF1 753 aaPredicted RBP22.85■■□□□ 1.25
CDCP1-202ENST00000425231 SYNPOQ8N3V7 929 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 TTC16Q8NEE8 873 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 ZMIZ2Q8NF64 920 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 SCAMP5Q8TAC9 235 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 ATRIPQ8WXE1 791 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 SMARCE1Q969G3 411 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 TWNKQ96RR1 684 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 SMOQ99835 787 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 LINC00597Q9H2U6 94 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 ECT2Q9H8V3 914 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 CYP3A43Q9HB55 503 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 CSNK1G1Q9HCP0 422 aa22.85■■□□□ 1.25
CDCP1-202ENST00000425231 DMAP1Q9NPF5 467 aaPredicted RBP22.85■■□□□ 1.25
CDCP1-202ENST00000425231 AP1G2O75843 785 aa22.84■■□□□ 1.25
CDCP1-202ENST00000425231 BEST1O76090 585 aa22.84■■□□□ 1.25
CDCP1-202ENST00000425231 ABL1P00519 1130 aa22.84■■□□□ 1.25
CDCP1-202ENST00000425231 EML3Q32P44 896 aa22.84■■□□□ 1.25
CDCP1-202ENST00000425231 ANKRD40Q6AI12 368 aa22.84■■□□□ 1.25
CDCP1-202ENST00000425231 ZC3H3Q8IXZ2 948 aaKnown RBP22.84■■□□□ 1.25
CDCP1-202ENST00000425231 SLC2A14Q8TDB8 520 aa22.84■■□□□ 1.25
CDCP1-202ENST00000425231 OVCA2Q8WZ82 227 aa22.84■■□□□ 1.25
CDCP1-202ENST00000425231 SEMA4DQ92854 862 aa22.84■■□□□ 1.25
CDCP1-202ENST00000425231 FBRSL1Q9HCM7 1045 aaKnown RBP22.84■■□□□ 1.25
CDCP1-202ENST00000425231 KRT82Q9NSB4 513 aa22.84■■□□□ 1.25
CDCP1-202ENST00000425231 FAM92AA1XBS5 289 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 LEFTY2O00292 366 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 EPB41P11171 864 aaKnown RBP22.83■■□□□ 1.25
CDCP1-202ENST00000425231 GJA4P35212 333 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 SLC5A3P53794 718 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 PPP2R5DQ14738 602 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 FSTL4Q6MZW2 842 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 WHAMMQ8TF30 809 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 ATP2A3Q93084 1043 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 FBXO32Q969P5 355 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 NIF3L1Q9GZT8 377 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 FAM49BQ9NUQ9 324 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 C2orf42Q9NWW7 574 aa22.83■■□□□ 1.25
CDCP1-202ENST00000425231 CHORDC1Q9UHD1 332 aaPredicted RBP22.83■■□□□ 1.25
CDCP1-202ENST00000425231 HOOK1Q9UJC3 728 aaKnown RBP22.83■■□□□ 1.25
CDCP1-202ENST00000425231 EP300Q09472 2414 aaPredicted RBP22.83■■□□□ 1.24
CDCP1-202ENST00000425231 GVINP1Q7Z2Y8 2422 aa22.83■■□□□ 1.24
CDCP1-202ENST00000425231 PAPSS2O95340 614 aaPredicted RBP22.82■■□□□ 1.24
CDCP1-202ENST00000425231 IFNAR2P48551 515 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 GALK1P51570 392 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 NRLP54845 237 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 FKBP3Q00688 224 aaKnown RBP22.82■■□□□ 1.24
CDCP1-202ENST00000425231 AMPD2Q01433 879 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 SNX30Q5VWJ9 437 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 CPA6Q8N4T0 437 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 PDZD8Q8NEN9 1154 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 COMMD8Q9NX08 183 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 ZNF292O60281 2723 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 CILPO75339 1184 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 GRSF1Q12849 480 aaKnown RBP eCLIP22.82■■□□□ 1.24
CDCP1-202ENST00000425231 NAIF1Q69YI7 327 aaPredicted RBP22.82■■□□□ 1.24
CDCP1-202ENST00000425231 FBXL13Q8NEE6 735 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 HNRNPABQ99729 332 aaKnown RBP22.82■■□□□ 1.24
CDCP1-202ENST00000425231 TSG101Q99816 390 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 NT5C1AQ9BXI3 368 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 GTPBP4Q9BZE4 634 aaKnown RBP22.82■■□□□ 1.24
CDCP1-202ENST00000425231 RAB20Q9NX57 234 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 CPQQ9Y646 472 aa22.82■■□□□ 1.24
CDCP1-202ENST00000425231 OTOGLQ3ZCN5 2332 aa22.81■■□□□ 1.24
CDCP1-202ENST00000425231 MYH10P35580 1976 aa22.81■■□□□ 1.24
CDCP1-202ENST00000425231 TRIM49BA6NDI0 452 aa22.81■■□□□ 1.24
CDCP1-202ENST00000425231 K7ESF4 209 aa22.81■■□□□ 1.24
CDCP1-202ENST00000425231 ZDHHC11BP0C7U3 371 aa22.81■■□□□ 1.24
CDCP1-202ENST00000425231 CD58P19256 250 aa22.81■■□□□ 1.24
CDCP1-202ENST00000425231 MXI1P50539 228 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms