RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TFDP2Q14188 446 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 EFTUD2Q15029 972 aaKnown RBP eCLIP15.89■□□□□ 0.134e-7■■■□□ 18.8
C9orf3-204ENST00000424143 BBS9Q3SYG4 887 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 FAM47CQ5HY64 1035 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 HP1BP3Q5SSJ5 553 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-204ENST00000424143 MTHFD1LQ6UB35 978 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 MYLK4Q86YV6 388 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-204ENST00000424143 CCDC60Q8IWA6 550 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-204ENST00000424143 CPXCR1Q8N123 301 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 AGBL3Q8NEM8 1001 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 SPDYE1Q8NFV5 336 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-204ENST00000424143 USP6NLQ92738 828 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 ARHGEF4Q9NR80 690 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 CISHQ9NSE2 258 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 CTDP1Q9Y5B0 961 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-204ENST00000424143 SMIM24O75264 130 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 KRT36O76013 467 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 SNUPNO95149 360 aaKnown RBP15.88■□□□□ 0.13
C9orf3-204ENST00000424143 MYL2P10916 166 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 CDC25CP30307 473 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 GABRB2P47870 512 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 CLCN2P51788 898 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 GDF10P55107 478 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 EIF3EP60228 445 aaKnown RBP15.88■□□□□ 0.13
C9orf3-204ENST00000424143 SARNPP82979 210 aaKnown RBP15.88■□□□□ 0.13
C9orf3-204ENST00000424143 FAAP100Q0VG06 881 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 WASHC5Q12768 1159 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 NOMO1Q15155 1222 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 DUOXA2Q1HG44 320 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 GNPTABQ3T906 1256 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 TIFABQ6ZNK6 161 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 ILDR2Q71H61 639 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 ARCQ7LC44 396 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 ARFGAP1Q8N6T3 406 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 MCUQ8NE86 351 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 SERAC1Q96JX3 654 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 PAK5Q9P286 719 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 TAGLN3Q9UI15 199 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 PLA2G4CQ9UP65 541 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 SSX2IPQ9Y2D8 614 aa15.88■□□□□ 0.13
C9orf3-204ENST00000424143 IGKV6D-21A0A0A0MT36 114 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 ZNF487B1APH4 448 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 COPEO14579 308 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 ADCY3O60266 1144 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 FAM189A1O60320 539 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 RFC1P35251 1148 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-204ENST00000424143 ELK3P41970 407 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 ACTR3P61158 418 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 XIAPP98170 497 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 OVGP1Q12889 678 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 BAATQ14032 418 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-204ENST00000424143 HNRNPDQ14103 355 aaKnown RBP15.87■□□□□ 0.13
C9orf3-204ENST00000424143 RCN2Q14257 317 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 AP1ARQ63HQ0 302 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 CAPN12Q6ZSI9 719 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 UNC45BQ8IWX7 931 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 TARS2Q9BW92 718 aaKnown RBP15.87■□□□□ 0.13
C9orf3-204ENST00000424143 RNF146Q9NTX7 359 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 ZDHHC7Q9NXF8 308 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 ADAMTS5Q9UNA0 930 aa15.87■□□□□ 0.13
C9orf3-204ENST00000424143 WDR91A4D1P6 747 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 GOLGA8SH3BPF8 625 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 GOLGA8MH3BSY2 632 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 VWA5AO00534 786 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 SNNO75324 88 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-204ENST00000424143 BANF1O75531 89 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 CIB2O75838 187 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 RGS20O76081 388 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 TOMM70O94826 608 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 TRUB2O95900 331 aaKnown RBP15.86■□□□□ 0.13
C9orf3-204ENST00000424143 OATP04181 439 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 PDHA1P08559 390 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 RBP3P10745 1247 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 PYGBP11216 843 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 BGNP21810 368 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 BRD2P25440 801 aaKnown RBP15.86■□□□□ 0.13
C9orf3-204ENST00000424143 CNTFP26441 200 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 IL1R2P27930 398 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 CRABP2P29373 138 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 SERPINB9P50453 376 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 SH3BGRP55822 239 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-204ENST00000424143 SCYL3Q8IZE3 742 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 PDCD7Q8N8D1 485 aaKnown RBP15.86■□□□□ 0.13
C9orf3-204ENST00000424143 REPS2Q8NFH8 660 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 MCRS1Q96EZ8 462 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 ZBTB45Q96K62 511 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-204ENST00000424143 FAM111AQ96PZ2 611 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 SRPK1Q96SB4 655 aaKnown RBP15.86■□□□□ 0.13
C9orf3-204ENST00000424143 TMEM39BQ9GZU3 492 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 FAM96AQ9H5X1 160 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 KRT82Q9NSB4 513 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 DLGAP2Q9P1A6 1054 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 FBXO40Q9UH90 709 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 TCRBV7S3A2A0A539 114 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 KLHL33A6NCF5 533 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 SPDYE5A6NIY4 337 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 SPECC1L-ADORA2AF8WAN1 911 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 TOM1L1O75674 476 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 SERPINA6P08185 405 aa15.86■□□□□ 0.13
C9orf3-204ENST00000424143 CRHR1P34998 444 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms