RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 KANSL1LA0AUZ9 987 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 MAN2B1O00754 1011 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 TADA3O75528 432 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 PRAMEF12O95522 483 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 ABL1P00519 1130 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 NUDT7P0C024 238 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 PFKLP17858 780 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 ERCC5P28715 1186 aaPredicted RBP11.59□□□□□ -0.55
USP49-204ENST00000423567 CACNA2D1P54289 1103 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 MAP3K7CLP57077 242 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 SLC8A3P57103 927 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 STARD6P59095 220 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 USP46P62068 366 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 FCHO2Q0JRZ9 810 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 KCNH2Q12809 1159 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 TAF10Q12962 218 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 ZNF268Q14587 947 aaPredicted RBP11.59□□□□□ -0.55
USP49-204ENST00000423567 CWF19L1Q69YN2 538 aaKnown RBP11.59□□□□□ -0.55
USP49-204ENST00000423567 TPRG1Q6ZUI0 275 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 PAQR9Q6ZVX9 377 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 PTCD2Q8WV60 388 aaKnown RBP11.59□□□□□ -0.55
USP49-204ENST00000423567 OVCA2Q8WZ82 227 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 FBXO32Q969P5 355 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 RSPRY1Q96DX4 576 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 TMEM176AQ96HP8 235 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 CNOT6LQ96LI5 555 aaKnown RBP11.59□□□□□ -0.55
USP49-204ENST00000423567 KCNK16Q96T55 309 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 SMG9Q9H0W8 520 aaKnown RBP11.59□□□□□ -0.55
USP49-204ENST00000423567 FBXO44Q9H4M3 255 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 TRPV5Q9NQA5 729 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 HEBP1Q9NRV9 189 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 TDP1Q9NUW8 608 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 RAPGEFL1Q9UHV5 662 aa11.59□□□□□ -0.55
USP49-204ENST00000423567 NCAM2O15394 837 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 NPR3P17342 541 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 HDCP19113 662 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 MTIF2P46199 727 aaKnown RBP11.58□□□□□ -0.56
USP49-204ENST00000423567 KPNA1P52294 538 aaPredicted RBP11.58□□□□□ -0.56
USP49-204ENST00000423567 SLC5A3P53794 718 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 UBXN2BQ14CS0 331 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 DPCR1Q3MIW9 517 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 CT47A1Q5JQC4 288 aaPredicted RBP11.58□□□□□ -0.56
USP49-204ENST00000423567 C1orf228Q6PIY5 440 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 ZNF852Q6ZMS4 543 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 PPM1KQ8N3J5 372 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 TMEM105Q8N8V8 129 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 EHBP1Q8NDI1 1231 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 TTC16Q8NEE8 873 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 WHAMMQ8TF30 809 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 USP13Q92995 863 aaPredicted RBP11.58□□□□□ -0.56
USP49-204ENST00000423567 MSANTD3Q96H12 275 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 NELL2Q99435 816 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 SMOQ99835 787 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 ARID3AQ99856 593 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 IRF2BPLQ9H1B7 796 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 THAP9Q9H5L6 903 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 SIT1Q9Y3P8 196 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 PIAS3Q9Y6X2 628 aa11.58□□□□□ -0.56
USP49-204ENST00000423567 C2orf78A6NCI8 922 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 ZNF840PA6NDX5 716 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 GLULP15104 373 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 CD19P15391 556 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 RAD23BP54727 409 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 PTPN5P54829 565 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 GCNT1Q02742 428 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 SGO2Q562F6 1265 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 PPP1R26Q5T8A7 1209 aaPredicted RBP11.57□□□□□ -0.56
USP49-204ENST00000423567 SASS6Q6UVJ0 657 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 CLEC20AQ6ZU45 233 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 ARL14EPQ8N8R7 260 aaPredicted RBP11.57□□□□□ -0.56
USP49-204ENST00000423567 SLC4A11Q8NBS3 891 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 SCAMP5Q8TAC9 235 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 GPT2Q8TD30 523 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 JAKMIP2Q96AA8 810 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 CYP2S1Q96SQ9 504 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 DDX23Q9BUQ8 820 aaKnown RBP11.57□□□□□ -0.56
USP49-204ENST00000423567 DUSP16Q9BY84 665 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 FOXQ1Q9C009 403 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 NACA2Q9H009 215 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 C8orf33Q9H7E9 229 aaPredicted RBP11.57□□□□□ -0.56
USP49-204ENST00000423567 CSNK1G1Q9HCP0 422 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 PNPLA8Q9NP80 782 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 LTB4R2Q9NPC1 389 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 TMEM30AQ9NV96 361 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 HESX1Q9UBX0 185 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 KIAA1257Q9ULG3 409 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 CCL26Q9Y258 94 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 PCDHB4Q9Y5E5 795 aa11.57□□□□□ -0.56
USP49-204ENST00000423567 FAM170BA6NMN3 283 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 TNFRSF10BO14763 440 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 PI15O43692 258 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 ACO1P21399 889 aaKnown RBP11.56□□□□□ -0.56
USP49-204ENST00000423567 MLLT6P55198 1093 aaPredicted RBP11.56□□□□□ -0.56
USP49-204ENST00000423567 AMPD2Q01433 879 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 MTF1Q14872 753 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 PDGFRLQ15198 375 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 ITPRIPL2Q3MIP1 535 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 HECTD3Q5T447 861 aa11.56□□□□□ -0.56
USP49-204ENST00000423567 ARHGAP17Q68EM7 881 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms