RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 KAT7O95251 611 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 KLF8O95600 359 aaPredicted RBP15.21■□□□□ 0.03
NFE4-201ENST00000420058 LDHAP00338 332 aaKnown RBP15.21■□□□□ 0.03
NFE4-201ENST00000420058 OAS1P00973 400 aaKnown RBP15.21■□□□□ 0.03
NFE4-201ENST00000420058 KRT19P08727 400 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 PDGFRBP09619 1106 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 TIE1P35590 1138 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 CACNA2D1P54289 1103 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 SEMA3BQ13214 749 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 PEAR1Q5VY43 1037 aaPredicted RBP15.21■□□□□ 0.03
NFE4-201ENST00000420058 SLC23A3Q6PIS1 610 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 C4orf50Q6ZRC1 276 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 DENND5BQ6ZUT9 1274 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 SYT12Q8IV01 421 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 PCED1BQ96HM7 432 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 CEP295NLQ96MC4 621 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 PNKPQ96T60 521 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 OLFML3Q9NRN5 406 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 INTS13Q9NVM9 706 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 TRPM5Q9NZQ8 1165 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 PILRBQ9UKJ0 227 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 CPQQ9Y646 472 aa15.21■□□□□ 0.03
NFE4-201ENST00000420058 TNRC6BQ9UPQ9 1833 aaKnown RBP15.2■□□□□ 0.02
NFE4-201ENST00000420058 SPAARA0A1B0GVQ0 90 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 UPK3BL1B0FP48 263 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 UPK3BL2E5RIL1 263 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 BMP15O95972 392 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 ENGP17813 658 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 WARSP23381 471 aaKnown RBP15.2■□□□□ 0.02
NFE4-201ENST00000420058 ITPKAP23677 461 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 GRIK1P39086 918 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 FAM193AP78312 1265 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 NOP14P78316 857 aaKnown RBP15.2■□□□□ 0.02
NFE4-201ENST00000420058 C8orf34Q49A92 452 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 KIAA1211LQ6NV74 962 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 ARMCX6Q7L4S7 300 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 LPCAT2Q7L5N7 544 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 TTC30AQ86WT1 665 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 MYCBPAPQ8TBZ2 947 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 HPDLQ96IR7 371 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 ZFRQ96KR1 1074 aaKnown RBP15.2■□□□□ 0.02
NFE4-201ENST00000420058 FSCN3Q9NQT6 498 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 SMPD4Q9NXE4 827 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 KLK13Q9UKR3 277 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 EXOC7Q9UPT5 735 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 NEUROG3Q9Y4Z2 214 aa15.2■□□□□ 0.02
NFE4-201ENST00000420058 GCN1Q92616 2671 aaKnown RBP15.2■□□□□ 0.02
NFE4-201ENST00000420058 KNL1Q8NG31 2342 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 FAM221BA6H8Z2 402 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 F8VP50 259 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 TULP1O00294 542 aaPredicted RBP15.19■□□□□ 0.02
NFE4-201ENST00000420058 PRPF6O94906 941 aaKnown RBP15.19■□□□□ 0.02
NFE4-201ENST00000420058 GCNT3O95395 438 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 CST3P01034 146 aaPredicted RBP15.19■□□□□ 0.02
NFE4-201ENST00000420058 GAP43P17677 238 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 HOXD13P35453 343 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 EIF2DP41214 584 aaKnown RBP15.19■□□□□ 0.02
NFE4-201ENST00000420058 GRIA2P42262 883 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 MAPK8P45983 427 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 PDE6CP51160 858 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 RING1Q06587 406 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 LMAN2Q12907 356 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 TAF10Q12962 218 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 SPDYCQ5MJ68 293 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 LARP1BQ659C4 914 aaKnown RBP15.19■□□□□ 0.02
NFE4-201ENST00000420058 LRSAM1Q6UWE0 723 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 ETFBKMTQ8IXQ9 262 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 GLIS3Q8NEA6 775 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 RASSF8Q8NHQ8 419 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 WHAMMQ8TF30 809 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 C8orf48Q96LL4 319 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 CLIC6Q96NY7 704 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 MRPL45Q9BRJ2 306 aaKnown RBP15.19■□□□□ 0.02
NFE4-201ENST00000420058 CFAP97Q9P2B7 532 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 STK17AQ9UEE5 414 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 FBXO2Q9UK22 296 aaPredicted RBP15.19■□□□□ 0.02
NFE4-201ENST00000420058 MSRB2Q9Y3D2 182 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 PCDHB13Q9Y5F0 798 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 CLIC4Q9Y696 253 aa15.19■□□□□ 0.02
NFE4-201ENST00000420058 HELZP42694 1942 aaKnown RBP15.19■□□□□ 0.02
NFE4-201ENST00000420058 APC2O95996 2303 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 BPTFQ12830 3046 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 A0A087X0B3 334 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 ALDH1A2O94788 518 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 TNFRSF4P43489 277 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 PPP3CCP48454 512 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 RABEP1Q15276 862 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 HSF5Q4G112 596 aaPredicted RBP15.18■□□□□ 0.02
NFE4-201ENST00000420058 LY6G5CQ5SRR4 150 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 SV2BQ7L1I2 683 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 MIB1Q86YT6 1006 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 CBWD2Q8IUF1 395 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 HMGB4Q8WW32 186 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 WBP2Q969T9 261 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 NUSAP1Q9BXS6 441 aaKnown RBP15.18■□□□□ 0.02
NFE4-201ENST00000420058 CAPN10Q9HC96 672 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 CD248Q9HCU0 757 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 ARHGEF4Q9NR80 690 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 ACACAQ13085 2346 aa15.18■□□□□ 0.02
NFE4-201ENST00000420058 ATXN2Q99700 1313 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms