RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 TRIM49D1C9J1S8 452 aa15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 ENO1P06733 434 aaKnown RBP15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 MIPP30301 263 aa15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 THOC5Q13769 683 aaKnown RBP15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 PRAMEF18Q5VWM3 479 aa15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 CDCA2Q69YH5 1023 aaPredicted RBP15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 SCG3Q8WXD2 468 aaKnown RBP15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 APOPT1Q96IL0 206 aa15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 FAM161BQ96MY7 647 aa15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 CPXM1Q96SM3 734 aa15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 NMUR2Q9GZQ4 415 aa15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 RAB6BQ9NRW1 208 aa15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 PPARGC1AQ9UBK2 798 aaKnown RBP15.84■□□□□ 0.13
SEMA3B-203ENST00000419007 H3BRJ5 948 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 HNRNPCL1O60812 293 aaKnown RBP15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 KCNA3P22001 575 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 PTPN7P35236 360 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 ARL2P36404 184 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 PGM1P36871 562 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 SERPINB4P48594 390 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 MRPS35P82673 323 aaKnown RBP15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 EEPD1Q7L9B9 569 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 POLNQ7Z5Q5 900 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 PRPF39Q86UA1 669 aaKnown RBP15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 WDR49Q8IV35 697 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 SYT15Q9BQS2 421 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 ZNF518BQ9C0D4 1074 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 SPATS2LQ9NUQ6 558 aaKnown RBP15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 PIM2Q9P1W9 311 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 PGAP2Q9UHJ9 254 aa15.83■□□□□ 0.13
SEMA3B-203ENST00000419007 PPP1R12AO14974 1030 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 CDH6P55285 790 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 YWHAEP62258 255 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 TMPRSS15P98073 1019 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 ROR1Q01973 937 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 KDSRQ06136 332 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 CXCL9Q07325 125 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 THEMIS2Q5TEJ8 643 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 PTCD3Q96EY7 689 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 OXNAD1Q96HP4 312 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 DHRS4Q9BTZ2 278 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 TLE6Q9H808 572 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 ZNF395Q9H8N7 513 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 KCNK13Q9HB14 408 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 HEY1Q9Y5J3 304 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 ADGRA2Q96PE1 1338 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 EME2A4GXA9 379 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 SIGLEC16A6NMB1 481 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 B2RBV5 119 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 E5RJQ4 531 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 I3L4J1 428 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 ADCY3O60266 1144 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 GRAP2O75791 330 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 DLDP09622 509 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 IRX4P78413 519 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 BMPR2Q13873 1038 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 CDHR3Q6ZTQ4 885 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 NIPA2Q8N8Q9 360 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 SPDYE1Q8NFV5 336 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 ZBTB10Q96DT7 871 aa15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 SRPK1Q96SB4 655 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.83■□□□□ 0.12
SEMA3B-203ENST00000419007 SPATA31C2B4DYI2 1134 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 PEX10O60683 326 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 TBX10O75333 385 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 PIGRP01833 764 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 RFC5P40937 340 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 IRX1P78414 480 aaPredicted RBP15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 GRIK3Q13003 919 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 TMEM132BQ14DG7 1078 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 SH3PXD2AQ5TCZ1 1133 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 ARID3BQ8IVW6 561 aaPredicted RBP15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 LRRC71Q8N4P6 559 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 CEP120Q8N960 986 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 PPFIBP2Q8ND30 876 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 NLGN2Q8NFZ4 835 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 WDR81Q562E7 1941 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 ZNF646O15015 1829 aaPredicted RBP15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 APOC4-APOC2K7ER74 178 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 ITGBL1O95965 494 aaPredicted RBP15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 APOC2P02655 101 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 ACADSP16219 412 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 CNTN2Q02246 1040 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 PRKD1Q15139 912 aaPredicted RBP15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 SCYL2Q6P3W7 929 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 UBR7Q8N806 425 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 RNF149Q8NC42 400 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 ZNF483Q8TF39 744 aaPredicted RBP15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 NRG4Q8WWG1 115 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 ZNF333Q96JL9 665 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 TUBB6Q9BUF5 446 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 FETUBQ9UGM5 382 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 USP18Q9UMW8 372 aa15.82■□□□□ 0.12
SEMA3B-203ENST00000419007 E7ESA3 106 aa15.81■□□□□ 0.12
SEMA3B-203ENST00000419007 TOM1L1O75674 476 aa15.81■□□□□ 0.12
SEMA3B-203ENST00000419007 PSMG1O95456 288 aa15.81■□□□□ 0.12
SEMA3B-203ENST00000419007 RAB6CQ53S08 254 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms