RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 RIPOR3Q96MK2 946 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 ELAC2Q9BQ52 826 aaKnown RBP3.17□□□□□ -1.9
VPS41-206ENST00000418457 TTPALQ9BTX7 342 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 ALG8Q9BVK2 526 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 COLEC11Q9BWP8 271 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 DHX36Q9H2U1 1008 aaKnown RBP3.17□□□□□ -1.9
VPS41-206ENST00000418457 CXorf36Q9H7Y0 433 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 KLC4Q9NSK0 619 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 TBC1D23Q9NUY8 699 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 SLC52A1Q9NWF4 448 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 LRIT1Q9P2V4 623 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 CDY1Q9Y6F8 540 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 EPN1Q9Y6I3 576 aaPredicted RBP3.17□□□□□ -1.9
VPS41-206ENST00000418457 ARHGEF12Q9NZN5 1544 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 E9PCH4 1651 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 CROCC2H7BZ55 1655 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 ADGRA2Q96PE1 1338 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 KDM5CP41229 1560 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 DENND4BO75064 1496 aaPredicted RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 PLEKHH2Q8IVE3 1493 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 MBD5Q9P267 1494 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 BRD4O60885 1362 aaPredicted RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 TARBP1Q13395 1621 aaKnown RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 ANKRD30BQ9BXX2 1392 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 A0A1W2PPC4 97 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 AQP7P3A6NL99 342 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 SLC16A3O15427 465 aaKnown RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 NCK2O43639 380 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 RGS10O43665 173 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 RRP9O43818 475 aaKnown RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 ORC4O43929 436 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 RAMP2O60895 175 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 SRGAP2O75044 1071 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 PIAS2O75928 621 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 RHOBTB3O94955 611 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 GCP02774 474 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 CSF1RP07333 972 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 PDHA1P08559 390 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 TPH1P17752 444 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 KRT4P19013 534 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 BTF3P20290 206 aaKnown RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 FGFR2P21802 821 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 ADORA2AP29274 412 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 ADRA1BP35368 520 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 PTDSS1P48651 473 aaKnown RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 ITGA8P53708 1063 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 IRX6P78412 446 aaPredicted RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 FSTL1Q12841 308 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 TBCCQ15814 346 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 TXNRD1Q16881 649 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 FAM209BQ5JX69 171 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 CERCAMQ5T4B2 595 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 ZNF618Q5T7W0 954 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 DEPDC1Q5TB30 811 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 KAZNQ674X7 775 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 KIAA0895LQ68EN5 471 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 BEND5Q7L4P6 421 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 KCTD20Q7Z5Y7 419 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 MRGPRGQ86SM5 289 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 LDLRAD3Q86YD5 345 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 FAM9BQ8IZU0 186 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 OR2C3Q8N628 320 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 SLC16A11Q8NCK7 471 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 ACRBPQ8NEB7 543 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 DNAJB14Q8TBM8 379 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 OSCP1Q8WVF1 389 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 ATRIPQ8WXE1 791 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 ATG4AQ8WYN0 398 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 SLC9A6Q92581 669 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 PBKQ96KB5 322 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 SCAND2PQ9GZW5 306 aaPredicted RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 PCED1AQ9H1Q7 454 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 TOR3AQ9H497 397 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 FAM83DQ9H4H8 585 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 GLOD4Q9HC38 313 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 NLRC4Q9NPP4 1024 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 TRMT13Q9NUP7 481 aaKnown RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 EHD3Q9NZN3 535 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 DNMT3BQ9UBC3 853 aaKnown RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 MYO1AQ9UBC5 1043 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 ING1Q9UK53 422 aaPredicted RBP3.16□□□□□ -1.9
VPS41-206ENST00000418457 PACSIN3Q9UKS6 424 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 IQGAP2Q13576 1575 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 KIF7Q2M1P5 1343 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 RALGAPBQ86X10 1494 aa3.16□□□□□ -1.9
VPS41-206ENST00000418457 LRPPRCP42704 1394 aaKnown RBP3.15□□□□□ -1.9
VPS41-206ENST00000418457 DHX29Q7Z478 1369 aaKnown RBP3.15□□□□□ -1.9
VPS41-206ENST00000418457 KIF15Q9NS87 1388 aa3.15□□□□□ -1.9
VPS41-206ENST00000418457 EPRSP07814 1512 aaKnown RBP3.15□□□□□ -1.9
VPS41-206ENST00000418457 MAGI3Q5TCQ9 1506 aa3.15□□□□□ -1.9
VPS41-206ENST00000418457 CLASP1Q7Z460 1538 aa3.15□□□□□ -1.9
VPS41-206ENST00000418457 PBRM1Q86U86 1689 aa3.15□□□□□ -1.9
VPS41-206ENST00000418457 WDR27A2RRH5 827 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 CCDC151A5D8V7 595 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 CLCA1A8K7I4 914 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 VWC2LB2RUY7 222 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 ADM5C9JUS6 153 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 AREL1O15033 823 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 CD3EAPO15446 510 aaKnown RBP3.15□□□□□ -1.91
VPS41-206ENST00000418457 NXPH3O95157 252 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms