RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 TRPC7Q9HCX4 862 aa19.05■□□□□ 0.64
SEMA3B-201ENST00000416295 UBE2TQ9NPD8 197 aaPredicted RBP19.05■□□□□ 0.64
SEMA3B-201ENST00000416295 IL37Q9NZH6 218 aa19.05■□□□□ 0.64
SEMA3B-201ENST00000416295 APEX2Q9UBZ4 518 aa19.05■□□□□ 0.64
SEMA3B-201ENST00000416295 MYO10Q9HD67 2058 aa19.05■□□□□ 0.64
SEMA3B-201ENST00000416295 NCANO14594 1321 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 TRAV19A0A0A6YYK7 116 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 VDRP11473 427 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 CD19P15391 556 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 SLC9A1P19634 815 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 PON1P27169 355 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 MFAP3P55082 362 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 GPC5P78333 572 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 SKOR2Q2VWA4 1001 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 SMYD5Q6GMV2 418 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 YAF2Q8IY57 180 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 CELF5Q8N6W0 485 aaKnown RBP19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 ANKRD20A12PQ8NF67 263 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 KREMEN1Q96MU8 473 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 FANCLQ9NW38 375 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 HESX1Q9UBX0 185 aa19.04■□□□□ 0.64
SEMA3B-201ENST00000416295 FAM92AA1XBS5 289 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 ZNF840PA6NDX5 716 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 PRAMEF12O95522 483 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 CKMP06732 381 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 USP17L7P0C7H9 530 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 BCAT1P54687 386 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 GRM2Q14416 872 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 ZNF268Q14587 947 aaPredicted RBP19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 ANO6Q4KMQ2 910 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 ANKRD52Q8NB46 1076 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 RBBP8NLQ8NC74 664 aaPredicted RBP19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 SCAMP5Q8TAC9 235 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 DNASE1L2Q92874 299 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 IRF7Q92985 503 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 BPIFA3Q9BQP9 254 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 BRD9Q9H8M2 597 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 TDP1Q9NUW8 608 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 TSPAN16Q9UKR8 245 aa19.03■□□□□ 0.64
SEMA3B-201ENST00000416295 HHLA1C9JL84 531 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 ZNF263O14978 683 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 KRT5P13647 590 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 GDI1P31150 447 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 ZNF132P52740 706 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 NHLH1Q02575 133 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 FCHO2Q0JRZ9 810 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 KRT31Q15323 416 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 STILQ15468 1287 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 GOLGA7BQ2TAP0 167 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 SIX5Q8N196 739 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 USP13Q92995 863 aaPredicted RBP19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 RSPRY1Q96DX4 576 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 UBXN6Q9BZV1 441 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 MFSD1Q9H3U5 465 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 ARHGEF3Q9NR81 526 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 TAB2Q9NYJ8 693 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 CNTN6Q9UQ52 1028 aa19.02■□□□□ 0.64
SEMA3B-201ENST00000416295 GREB1Q4ZG55 1949 aa19.02■□□□□ 0.63
SEMA3B-201ENST00000416295 C2orf78A6NCI8 922 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 O00370 1275 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 ABL1P00519 1130 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 HDCP19113 662 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 NUBP1P53384 320 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 PTPN5P54829 565 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 TTC30AQ86WT1 665 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 GPIHBP1Q8IV16 184 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 AOPEPQ8N6M6 819 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 BPIFB1Q8TDL5 484 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 SHDQ96IW2 340 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 SMG9Q9H0W8 520 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 TRPV5Q9NQA5 729 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 THG1LQ9NWX6 298 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 CA14Q9ULX7 337 aa19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 NUP210Q8TEM1 1887 aaPredicted RBP19.01■□□□□ 0.63
SEMA3B-201ENST00000416295 RNF225M0QZC1 329 aaPredicted RBP19■□□□□ 0.63
SEMA3B-201ENST00000416295 CHADO15335 359 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 OAS1P00973 400 aaKnown RBP19■□□□□ 0.63
SEMA3B-201ENST00000416295 SETSIPP0DME0 302 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 TUBP50607 506 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 KIF11P52732 1056 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 PLCB2Q00722 1185 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 BST2Q10589 180 aaKnown RBP19■□□□□ 0.63
SEMA3B-201ENST00000416295 NCAPHQ15003 741 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 CNGA2Q16280 664 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 ARHGAP29Q52LW3 1261 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 SNX30Q5VWJ9 437 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 GJB7Q6PEY0 223 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 LCLAT1Q6UWP7 414 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 GPRIN1Q7Z2K8 1008 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 PIGZQ86VD9 579 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 ARL14EPQ8N8R7 260 aaPredicted RBP19■□□□□ 0.63
SEMA3B-201ENST00000416295 SLC22A12Q96S37 553 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 VPS16Q9H269 839 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 SIX2Q9NPC8 291 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 TLR8Q9NR97 1041 aaKnown RBP19■□□□□ 0.63
SEMA3B-201ENST00000416295 GMIPQ9P107 970 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 SCML2Q9UQR0 700 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 OBSL1O75147 1896 aa19■□□□□ 0.63
SEMA3B-201ENST00000416295 WDFY4Q6ZS81 3184 aa18.99■□□□□ 0.63
SEMA3B-201ENST00000416295 SYCE3A1L190 88 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms