RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 AWAT2Q6E213 333 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 AMIGO2Q86SJ2 522 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 NIM1KQ8IY84 436 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 TSPEARQ8WU66 669 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 RAPGEF4Q8WZA2 1011 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 SLC5A5Q92911 643 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 NINJ1Q92982 152 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 MARS2Q96GW9 593 aaKnown RBP3.08□□□□□ -1.92
LINC00428-201ENST00000415620 ANLNQ9NQW6 1124 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 USP9XQ93008 2570 aaPredicted RBP3.08□□□□□ -1.92
LINC00428-201ENST00000415620 CGNL1Q0VF96 1302 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 CDHR2Q9BYE9 1310 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 TONSLQ96HA7 1378 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 TENM4Q6N022 2769 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 LOC400499M0QZD8 3231 aa3.08□□□□□ -1.92
LINC00428-201ENST00000415620 ANKRD17O75179 2603 aaKnown RBP3.07□□□□□ -1.92
LINC00428-201ENST00000415620 AK9Q5TCS8 1911 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 TRGV11A0A075B6L2 103 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 WDR27A2RRH5 827 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 PRR23D1E9PI22 279 aaPredicted RBP3.07□□□□□ -1.92
LINC00428-201ENST00000415620 TFRCP02786 760 aaKnown RBP3.07□□□□□ -1.92
LINC00428-201ENST00000415620 PRR23D2P0DMB1 279 aaPredicted RBP3.07□□□□□ -1.92
LINC00428-201ENST00000415620 RAP2AP10114 183 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 FPR1P21462 350 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 ENPP1P22413 925 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 FKBP1BP68106 108 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 PPP3CAQ08209 521 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 ADRM1Q16186 407 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 NFE2L2Q16236 605 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 UGT8Q16880 541 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.07□□□□□ -1.92
LINC00428-201ENST00000415620 FAM153CQ494X1 144 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 SUMO4Q6EEV6 95 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 ZNF529Q6P280 563 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 DGLUCYQ7Z3D6 616 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 NECAB2Q7Z6G3 386 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 PQLC1Q8N2U9 271 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 PPM1KQ8N3J5 372 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 IP6K1Q92551 441 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 RMDN1Q96DB5 314 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 RAX2Q96IS3 184 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 DEFB118Q96PH6 123 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 HNRNPABQ99729 332 aaKnown RBP3.07□□□□□ -1.92
LINC00428-201ENST00000415620 MYOCQ99972 504 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 VPS33BQ9H267 617 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.07□□□□□ -1.92
LINC00428-201ENST00000415620 LANCL2Q9NS86 450 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 DPP7Q9UHL4 492 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 EDARQ9UNE0 448 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 NOC2LQ9Y3T9 749 aaKnown RBP3.07□□□□□ -1.92
LINC00428-201ENST00000415620 RIPOR2Q9Y4F9 1068 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 LRP12Q9Y561 859 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 SCN9AQ15858 1988 aa3.07□□□□□ -1.92
LINC00428-201ENST00000415620 RELNP78509 3460 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 PRR23AA6NEV1 266 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 PFASO15067 1338 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 PPIP5K2O43314 1243 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 RAB11FIP3O75154 756 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 CAMTA2O94983 1202 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 CD1AP06126 327 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 NPR1P16066 1061 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 HOXC9P31274 260 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 IL2P60568 153 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 MRPS9P82933 396 aaKnown RBP3.06□□□□□ -1.92
LINC00428-201ENST00000415620 PSME4Q14997 1843 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 TCEA2Q15560 299 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 ZNF782Q6ZMW2 699 aaPredicted RBP3.06□□□□□ -1.92
LINC00428-201ENST00000415620 NEK8Q86SG6 692 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 C11orf74Q86VG3 221 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 ZDHHC17Q8IUH5 632 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 SAMD14Q8IZD0 417 aaPredicted RBP3.06□□□□□ -1.92
LINC00428-201ENST00000415620 AHI1Q8N157 1196 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 FITM2Q8N6M3 262 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 CNBD1Q8NA66 436 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 OR2W6PQ8NHA6 318 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 TFAP2BQ92481 460 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 FBXL20Q96IG2 436 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 ACAP3Q96P50 834 aa3.06□□□□□ -1.92
LINC00428-201ENST00000415620 TARS2Q9BW92 718 aaKnown RBP3.06□□□□□ -1.92
LINC00428-201ENST00000415620 RBM12Q9NTZ6 932 aaKnown RBP3.06□□□□□ -1.92
LINC00428-201ENST00000415620 VSX1Q9NZR4 365 aaPredicted RBP3.06□□□□□ -1.92
LINC00428-201ENST00000415620 DUOX1Q9NRD9 1551 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 NCAPD2Q15021 1401 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 PRAMEF33A0A0G2JMD5 474 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 YDJCA8MPS7 323 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 GCOM1H8Y6P7 765 aaPredicted RBP3.05□□□□□ -1.92
LINC00428-201ENST00000415620 PPEF2O14830 753 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 TEX33O43247 280 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 PRAMEF10O60809 474 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 FCER1AP12319 257 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 ALAS1P13196 640 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 BPIP17213 487 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 GATA3P23771 443 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 CERS1P27544 350 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 PCSK1P29120 753 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 CCKARP32238 428 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 SLC6A9P48067 706 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 CDK17Q00537 523 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 LAMB3Q13751 1172 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 SART3Q15020 963 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms