RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 CASTOR2A6NHX0 329 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 MEIS3P2A8K0S8 358 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 DCDC2CA8MYV0 355 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 C9IYK1 514 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 INPPL1O15357 1258 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 PQBP1O60828 265 aaKnown RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 ZRANB2O95218 330 aaKnown RBP eCLIP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 PARNO95453 639 aaKnown RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 POMCP01189 267 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 ERBB2P04626 1255 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 PYGMP11217 842 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 FGFR1P11362 822 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 PTPN1P18031 435 aaKnown RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 PSMA2P25787 234 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 PCSK1P29120 753 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 ADORA2BP29275 332 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 ACADSBP45954 432 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 RGS7P49802 495 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 RPL7AP62424 266 aaKnown RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 FAM189BP81408 668 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 BST2Q10589 180 aaKnown RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 ZNF211Q13398 564 aaPredicted RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 MBTPS1Q14703 1052 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 MTFR1Q15390 333 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 UPP1Q16831 310 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 HADHQ16836 314 aaKnown RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 TUSC1Q2TAM9 212 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 NOMO2Q5JPE7 1267 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 FAM102AQ5T9C2 384 aaPredicted RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 LRRC38Q5VT99 294 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 WSCD1Q658N2 575 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 OR6B2Q6IFH4 312 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 LLGL2Q6P1M3 1020 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 CC2D1AQ6P1N0 951 aaPredicted RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 DCLRE1AQ6PJP8 1040 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 MAATS1Q7Z4T9 603 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 FAM126BQ8IXS8 530 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 IFT20Q8IY31 132 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 KATNAL2Q8IYT4 538 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 MEIOBQ8N635 442 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 NIPA2Q8N8Q9 360 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 C12orf29Q8N999 325 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 B3GALNT2Q8NCR0 500 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 FNIP1Q8TF40 1166 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 HNRNPLLQ8WVV9 542 aaKnown RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 MCRS1Q96EZ8 462 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 RUNDC3BQ96NL0 473 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 FAM193BQ96PV7 902 aaPredicted RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 PNKPQ96T60 521 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 HNRNPABQ99729 332 aaKnown RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 MED10Q9BTT4 135 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 LRRC1Q9BTT6 524 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 AP1M1Q9BXS5 423 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 TRIM7Q9C029 511 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 DPEP3Q9H4B8 488 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 ELAC1Q9H777 363 aaKnown RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 CYLDQ9NQC7 956 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 ASNSD1Q9NWL6 643 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 DDX56Q9NY93 547 aaKnown RBP6.98□□□□□ -1.29
HDAC8-211ENST00000415409 STIM2Q9P246 746 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 TMEM59LQ9UK28 342 aa6.98□□□□□ -1.29
HDAC8-211ENST00000415409 E5RJQ4 531 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 ENPP3O14638 875 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 GABRDO14764 452 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 ATP8B1O43520 1251 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 RNF8O76064 485 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 B3GAT3O94766 335 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 GJB6O95452 261 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 KRT7P08729 469 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 CCDC130P13994 396 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 LMO2P25791 158 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 CHRNA3P32297 505 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 RFC1P35251 1148 aaPredicted RBP6.97□□□□□ -1.29
HDAC8-211ENST00000415409 GJC1P36383 396 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 SCNN1AP37088 669 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 MARCKSL1P49006 195 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 AARSP49588 968 aaKnown RBP eCLIP6.97□□□□□ -1.293e-6■■■■■ 61.8
HDAC8-211ENST00000415409 AFF1P51825 1210 aaKnown RBP6.97□□□□□ -1.29
HDAC8-211ENST00000415409 VSNL1P62760 191 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 RNASELQ05823 741 aaKnown RBP6.97□□□□□ -1.29
HDAC8-211ENST00000415409 ACAP1Q15027 740 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 MDH1BQ5I0G3 518 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 ZFYVE27Q5T4F4 411 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 DCAF12L1Q5VU92 463 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 PMF1Q6P1K2 205 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 SLC39A5Q6ZMH5 540 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 CCNI2Q6ZMN8 369 aaPredicted RBP6.97□□□□□ -1.29
HDAC8-211ENST00000415409 ANKRD33Q7Z3H0 272 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 TMEM110Q86TL2 294 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 RTN4RL1Q86UN2 441 aaPredicted RBP6.97□□□□□ -1.29
HDAC8-211ENST00000415409 OSTM1Q86WC4 334 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 TTC30AQ86WT1 665 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 SLC13A5Q86YT5 568 aaPredicted RBP6.97□□□□□ -1.29
HDAC8-211ENST00000415409 CCDC50Q8IVM0 306 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 CCDC116Q8IYX3 515 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 RCOR2Q8IZ40 523 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 ABI1Q8IZP0 508 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 THEM5Q8N1Q8 247 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 EXD1Q8NHP7 514 aa6.97□□□□□ -1.29
HDAC8-211ENST00000415409 SLC2A14Q8TDB8 520 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms