RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 SMOQ99835 787 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 CRACR2AQ9BSW2 395 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 PLA2G2FQ9BZM2 168 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 NACA2Q9H009 215 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 SMOC2Q9H3U7 446 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 ARHGEF3Q9NR81 526 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 TLR8Q9NR97 1041 aaKnown RBP15.55■□□□□ 0.08
CHD1-202ENST00000414220 SAMSN1Q9NSI8 373 aaKnown RBP15.55■□□□□ 0.08
CHD1-202ENST00000414220 TMEM63CQ9P1W3 806 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 APEX2Q9UBZ4 518 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 CA14Q9ULX7 337 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 ZNF840PA6NDX5 716 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 SMTNL1A8MU46 457 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 USP46P62068 366 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 TYRO3Q06418 890 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 HSP90AA4PQ58FG1 418 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 FKBP15Q5T1M5 1219 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 TRIM65Q6PJ69 517 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 HFE2Q6ZVN8 426 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 TADA2BQ86TJ2 420 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 FLCNQ8NFG4 579 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 MSANTD3Q96H12 275 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 NELL2Q99435 816 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 PRRX2Q99811 253 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 C11orf16Q9NQ32 467 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 TRPV5Q9NQA5 729 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 MRPS17Q9Y2R5 130 aaKnown RBP15.54■□□□□ 0.08
CHD1-202ENST00000414220 MYO10Q9HD67 2058 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 DOCK6Q96HP0 2047 aa15.54■□□□□ 0.08
CHD1-202ENST00000414220 DOCK8Q8NF50 2099 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 NOTCH4Q99466 2003 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 NCANO14594 1321 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 MAN2B1O00754 1011 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 TNFRSF10BO14763 440 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 MED7O43513 233 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 SETSIPP0DME0 302 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 ACO1P21399 889 aaKnown RBP15.53■□□□□ 0.08
CHD1-202ENST00000414220 PSEN1P49768 467 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 CLCN5P51795 746 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 BCAT1P54687 386 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 AMPD2Q01433 879 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 FCHO2Q0JRZ9 810 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 MLF2Q15773 248 aaPredicted RBP15.53■□□□□ 0.08
CHD1-202ENST00000414220 HECTD3Q5T447 861 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 PHLDB3Q6NSJ2 640 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 DDX42Q86XP3 938 aaKnown RBP eCLIP15.53■□□□□ 0.08
CHD1-202ENST00000414220 GPIHBP1Q8IV16 184 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 ARHGAP18Q8N392 663 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 ARL14EPQ8N8R7 260 aaPredicted RBP15.53■□□□□ 0.08
CHD1-202ENST00000414220 RBBP8NLQ8NC74 664 aaPredicted RBP15.53■□□□□ 0.08
CHD1-202ENST00000414220 SCAMP5Q8TAC9 235 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 EXOC4Q96A65 974 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 LRRC4Q9HBW1 653 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 IL37Q9NZH6 218 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 CHORDC1Q9UHD1 332 aaPredicted RBP15.53■□□□□ 0.08
CHD1-202ENST00000414220 TSPAN16Q9UKR8 245 aa15.53■□□□□ 0.08
CHD1-202ENST00000414220 BECN2A8MW95 431 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 NRG2O14511 850 aaPredicted RBP15.52■□□□□ 0.08
CHD1-202ENST00000414220 NCAM2O15394 837 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 TADA3O75528 432 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 BEST1O76090 585 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 GLULP15104 373 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 SLC9A1P19634 815 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 PON1P27169 355 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 USP8P40818 1118 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 TUBP50607 506 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 KPNA1P52294 538 aaPredicted RBP15.52■□□□□ 0.08
CHD1-202ENST00000414220 NUBP1P53384 320 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 MLLT6P55198 1093 aaPredicted RBP15.52■□□□□ 0.08
CHD1-202ENST00000414220 TPM4P67936 248 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 GOLGA8FQ08AF8 430 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 GOLGA8DPQ0D2H9 430 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 BST2Q10589 180 aaKnown RBP15.52■□□□□ 0.08
CHD1-202ENST00000414220 GOLGA7BQ2TAP0 167 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 SNX30Q5VWJ9 437 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 ASTLQ6HA08 431 aaPredicted RBP15.52■□□□□ 0.08
CHD1-202ENST00000414220 POTEHQ6S545 545 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 ZNF852Q6ZMS4 543 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 ARHGEF19Q8IW93 802 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 UBR7Q8N806 425 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 TTC16Q8NEE8 873 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 ZMIZ2Q8NF64 920 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 USP13Q92995 863 aaPredicted RBP15.52■□□□□ 0.08
CHD1-202ENST00000414220 CDK5RAP1Q96SZ6 601 aaKnown RBP15.52■□□□□ 0.08
CHD1-202ENST00000414220 C8orf33Q9H7E9 229 aaPredicted RBP15.52■□□□□ 0.08
CHD1-202ENST00000414220 TMEM30AQ9NV96 361 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 FANCLQ9NW38 375 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 ARHGAP26Q9UNA1 814 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 SCML2Q9UQR0 700 aa15.52■□□□□ 0.08
CHD1-202ENST00000414220 FAM92AA1XBS5 289 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 C2orf78A6NCI8 922 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 XPO1O14980 1071 aaKnown RBP15.51■□□□□ 0.07
CHD1-202ENST00000414220 PRAMEF12O95522 483 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 MBL2P11226 248 aaPredicted RBP15.51■□□□□ 0.07
CHD1-202ENST00000414220 RALAP11233 206 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 KIF11P52732 1056 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 STARD6P59095 220 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 SLC7A9P82251 487 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 PDGFRLQ15198 375 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 CNGA2Q16280 664 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms