RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SYTL5Q8TDW5 730 aaPredicted RBP9.85□□□□□ -0.83
SNHG3-201ENST00000413987 LRRC15Q8TF66 581 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 NSMCE1Q8WV22 266 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 LMBR1Q8WVP7 490 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 HAS1Q92839 578 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 KIAA1191Q96A73 305 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 TRIM47Q96LD4 638 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 TUBGCP2Q9BSJ2 902 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 BCO2Q9BYV7 579 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 BLZF1Q9H2G9 400 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 ACAD9Q9H845 621 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 WASH6PQ9NQA3 447 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 AGPAT5Q9NUQ2 364 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 RBPJLQ9UBG7 517 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 FAM153AQ9UHL3 310 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 BAIAP2L1Q9UHR4 511 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 C15orf41Q9Y2V0 281 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 A0A087WV62 115 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 A0A087X0M5 115 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 A0A1B0GX30 115 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 A0A1W2PRU2 124 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 FRMD3A2A2Y4 597 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 A6NHS1 94 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 CCT8L1PA6NM43 557 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 FOXD2O60548 495 aaPredicted RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 PF4P02776 101 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 OR52Z1P0C646 297 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 HSPA1AP0DMV8 641 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 HSPA1BP0DMV9 641 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 POU3F2P20265 443 aaPredicted RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 HOXA7P31268 230 aaPredicted RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 SREBF1P36956 1147 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 HSD17B4P51659 736 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 ODF2Q5BJF6 829 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 CAPRIN2Q6IMN6 1127 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 RNF207Q6ZRF8 634 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 LPCAT2Q7L5N7 544 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 CACNA2D4Q7Z3S7 1137 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 NCAPG2Q86XI2 1143 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 CCDC63Q8NA47 563 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 DIS3LQ8TF46 1054 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 PTCD2Q8WV60 388 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 SHC3Q92529 594 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 LENG9Q96B70 501 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 DHTKD1Q96HY7 919 aaPredicted RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 ANKRD27Q96NW4 1050 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 ERGIC2Q96RQ1 377 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 INTS10Q9NVR2 710 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 NOP53Q9NZM5 478 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 CORO1CQ9ULV4 474 aaPredicted RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 PLAGL2Q9UPG8 496 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 PASKQ96RG2 1323 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 A0A1W2PPH5 198 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 KRBA1A5PL33 1030 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 AOC2O75106 756 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 TSC22D2O75157 780 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 LUC7L3O95232 432 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 CNTN2Q02246 1040 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 TRAF1Q13077 416 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 SNAP47Q5SQN1 464 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 HGSNATQ68CP4 663 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 RPUSD3Q6P087 351 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 DTHD1Q6ZMT9 781 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 BZW1Q7L1Q6 419 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 KRT74Q7RTS7 529 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 RASAL3Q86YV0 1011 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 ANKRD13CQ8N6S4 541 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 PPM1NQ8N819 430 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 CCDC197Q8NCU1 140 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 PLD4Q96BZ4 506 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 BICD1Q96G01 975 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 MTMR9Q96QG7 549 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 SPATC1LQ9H0A9 340 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 PORCNQ9H237 461 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 LIN28AQ9H9Z2 209 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 ABT1Q9ULW3 272 aaKnown RBP9.84□□□□□ -0.83
SNHG3-201ENST00000413987 POLHQ9Y253 713 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 ASTN1O14525 1302 aa9.84□□□□□ -0.83
SNHG3-201ENST00000413987 TRPM7Q96QT4 1865 aa9.84□□□□□ -0.84
SNHG3-201ENST00000413987 PGK2P07205 417 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 MAGEA1P43355 309 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 GBE1Q04446 702 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 ITIH4Q14624 930 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 APLFQ8IW19 511 aaPredicted RBP9.83□□□□□ -0.84
SNHG3-201ENST00000413987 CCDC26Q8TAB7 109 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 CASKIN2Q8WXE0 1202 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 RAPGEF5Q92565 580 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 TLR10Q9BXR5 811 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 ISCUQ9H1K1 167 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 TSPAN10Q9H1Z9 355 aaPredicted RBP9.83□□□□□ -0.84
SNHG3-201ENST00000413987 MLXIPQ9HAP2 919 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 KIF9Q9HAQ2 790 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 UBAP1Q9NZ09 502 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 TBC1D7Q9P0N9 293 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 TBC1D29Q9UFV1 150 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 A0A0G2JMZ2 1700 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 PGPEP1LA6NFU8 196 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 LRRC72A6NJI9 287 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 IGF2BP3O00425 579 aaKnown RBP eCLIP9.83□□□□□ -0.84
SNHG3-201ENST00000413987 CES2O00748 559 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms