RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SLC5A3P53794 718 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 MORC3Q14149 939 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 GAS6Q14393 721 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 ZNF77Q15935 545 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 CCDC40Q4G0X9 1142 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 Q6ZS52 159 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 RALGPS2Q86X27 583 aaPredicted RBP10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 CREBRFQ8IUR6 639 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 ELOA2Q8IYF1 753 aaPredicted RBP10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 FBXL13Q8NEE6 735 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 ZMIZ2Q8NF64 920 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 NKD2Q969F2 451 aaPredicted RBP10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 SMARCD1Q96GM5 515 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 DHTKD1Q96HY7 919 aaPredicted RBP10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 SLITRK1Q96PX8 696 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 ARID3AQ99856 593 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 KIF9Q9HAQ2 790 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 CYP3A43Q9HB55 503 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 FBRSL1Q9HCM7 1045 aaKnown RBP10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 DMAP1Q9NPF5 467 aaPredicted RBP10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 EHD2Q9NZN4 543 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 GMIPQ9P107 970 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 ARMCX3Q9UH62 379 aaPredicted RBP10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 CPQQ9Y646 472 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 ZNF318Q5VUA4 2279 aa10.79□□□□□ -0.68
NCKIPSD-202ENST00000413374 KMT2EQ8IZD2 1858 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 SOBPA7XYQ1 873 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 TNFRSF10BO14763 440 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 SLC16A3O15427 465 aaKnown RBP10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 CILPO75339 1184 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 RTN3O95197 1032 aaPredicted RBP10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 FAM200BP0CF97 657 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 ANP32AP39687 249 aaKnown RBP10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 RPS9P46781 194 aaKnown RBP10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 PPP3CCP48454 512 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 PGFP49763 221 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 GALK1P51570 392 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 UBE2HP62256 183 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 LRRC63Q05C16 580 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 ENPEPQ07075 957 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 ZNF268Q14587 947 aaPredicted RBP10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 PPP1R26Q5T8A7 1209 aaPredicted RBP10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 GPRIN1Q7Z2K8 1008 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 FILIP1Q7Z7B0 1213 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 ZC3H3Q8IXZ2 948 aaKnown RBP10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 OSCP1Q8WVF1 389 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 CHFRQ96EP1 664 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 CEP295NLQ96MC4 621 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 HNRNPABQ99729 332 aaKnown RBP10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 CCSER2Q9H7U1 834 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 ECT2Q9H8V3 914 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 CISHQ9NSE2 258 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 CFAP97Q9P2B7 532 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 TCHHQ07283 1943 aa10.78□□□□□ -0.68
NCKIPSD-202ENST00000413374 MUC6Q6W4X9 2439 aa10.77□□□□□ -0.68
NCKIPSD-202ENST00000413374 COCHO43405 550 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 TBX18O95935 607 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 EGFP01133 1207 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 TRIM21P19474 475 aaKnown RBP10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 ACO1P21399 889 aaKnown RBP10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 GJA4P35212 333 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 MAGEA9P43362 315 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 CXCL12P48061 93 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 MLLT6P55198 1093 aaPredicted RBP10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 MCCD1P59942 119 aaPredicted RBP10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 SATB1Q01826 763 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 INCA1Q0VD86 236 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 LRRC32Q14392 662 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 PDGFRLQ15198 375 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 EML3Q32P44 896 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 HECTD3Q5T447 861 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 TTI2Q6NXR4 508 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 CLEC20AQ6ZU45 233 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 SLC35C1Q96A29 364 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 TMEM176AQ96HP8 235 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 SRRTQ9BXP5 876 aaKnown RBP10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 GTPBP4Q9BZE4 634 aaKnown RBP10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 NACA2Q9H009 215 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 CHRDQ9H2X0 955 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 METTL14Q9HCE5 456 aaKnown RBP10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 POLR3BQ9NW08 1133 aaPredicted RBP10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 C2orf42Q9NWW7 574 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 NUDT5Q9UKK9 219 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 FBXO4Q9UKT5 387 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 ARHGAP26Q9UNA1 814 aa10.77□□□□□ -0.69
NCKIPSD-202ENST00000413374 PRR23AA6NEV1 266 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 HHLA1C9JL84 531 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 PROB1E7EW31 1015 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 OAS1P00973 400 aaKnown RBP10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 CALCAP01258 141 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 IRF1P10914 325 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 PPP1R2P41236 205 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 FMO5P49326 533 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 PDE6CP51160 858 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 RAD23BP54727 409 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 SLC7A9P82251 487 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 DMWDQ09019 674 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 GRSF1Q12849 480 aaKnown RBP eCLIP10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 USP4Q13107 963 aa10.76□□□□□ -0.69
NCKIPSD-202ENST00000413374 PAK1Q13153 545 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms