RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 OGDHQ02218 1023 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 PIGHQ14442 188 aaPredicted RBP13.63□□□□□ -0.23
LITAF-203ENST00000413364 PTPN20Q4JDL3 420 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 ANO7Q6IWH7 933 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 RCOR2Q8IZ40 523 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 ARHGAP18Q8N392 663 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 ARL10Q8N8L6 244 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 ATP11CQ8NB49 1132 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 SMC1BQ8NDV3 1235 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 OR2W6PQ8NHA6 318 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 GRK7Q8WTQ7 553 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 ATG4AQ8WYN0 398 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 ART4Q93070 314 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 TMEM176AQ96HP8 235 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 TWNKQ96RR1 684 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 HEMGNQ9BXL5 484 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 FAM192AQ9GZU8 254 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 PLEKHA5Q9HAU0 1116 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.63□□□□□ -0.23
LITAF-203ENST00000413364 MTRF1LQ9UGC7 380 aaKnown RBP13.63□□□□□ -0.23
LITAF-203ENST00000413364 HMGXB4Q9UGU5 601 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 CYTH4Q9UIA0 394 aa13.63□□□□□ -0.23
LITAF-203ENST00000413364 R3HDM2Q9Y2K5 976 aaKnown RBP13.63□□□□□ -0.23
LITAF-203ENST00000413364 MBLAC1A4D2B0 266 aaPredicted RBP13.62□□□□□ -0.23
LITAF-203ENST00000413364 IGF2BP3O00425 579 aaKnown RBP eCLIP13.62□□□□□ -0.235e-7■■□□□ 12.8
LITAF-203ENST00000413364 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 FAM200BP0CF97 657 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 ZNF865P0CJ78 1059 aaPredicted RBP13.62□□□□□ -0.23
LITAF-203ENST00000413364 PMS2P54278 862 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 KRT17Q04695 432 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 KLC1Q07866 573 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 ORC1Q13415 861 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 TLK2Q86UE8 772 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 FLRT1Q9NZU1 646 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 DERAQ9Y315 318 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 SLC4A7Q9Y6M7 1214 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 SMIM35A0A1B0GVV1 85 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 F8VP50 259 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 HOXA11P31270 313 aaPredicted RBP13.62□□□□□ -0.23
LITAF-203ENST00000413364 TMEM62Q0P6H9 643 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 INCA1Q0VD86 236 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 NFX1Q12986 1120 aaKnown RBP13.62□□□□□ -0.23
LITAF-203ENST00000413364 PTK6Q13882 451 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 CCNG2Q16589 344 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 OLFML2BQ68BL8 750 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 SLC27A1Q6PCB7 646 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 RUFY4Q6ZNE9 571 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 CATSPER4Q7RTX7 472 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 RASAL3Q86YV0 1011 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 TTC39CQ8N584 583 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 CORO1BQ9BR76 489 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 WHRNQ9P202 907 aa13.62□□□□□ -0.23
LITAF-203ENST00000413364 KAT6AQ92794 2004 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 MANSC4A6NHS7 340 aaPredicted RBP13.61□□□□□ -0.23
LITAF-203ENST00000413364 SIGLEC16A6NMB1 481 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 PFDN1O60925 122 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 ATP2C2O75185 946 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 MICAL2O94851 1124 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 GAS8O95995 478 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 KRT1P04264 644 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 VDRP11473 427 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 TCF4P15884 667 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 EIF3BP55884 814 aaKnown RBP13.61□□□□□ -0.23
LITAF-203ENST00000413364 PHEXP78562 749 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 ATP11AP98196 1134 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 MFSD10Q14728 455 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 PCBP1Q15365 356 aaKnown RBP eCLIP13.61□□□□□ -0.23
LITAF-203ENST00000413364 ANKS1BQ7Z6G8 1248 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 SNRNP27Q8WVK2 155 aaKnown RBP13.61□□□□□ -0.23
LITAF-203ENST00000413364 USP6NLQ92738 828 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 PPP2R3CQ969Q6 453 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 RNF25Q96BH1 459 aaPredicted RBP13.61□□□□□ -0.23
LITAF-203ENST00000413364 SLITRK1Q96PX8 696 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 EPB41L4BQ9H329 900 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 PABPC3Q9H361 631 aaKnown RBP13.61□□□□□ -0.23
LITAF-203ENST00000413364 CDHR5Q9HBB8 845 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 BARX2Q9UMQ3 279 aaPredicted RBP13.61□□□□□ -0.23
LITAF-203ENST00000413364 GINS2Q9Y248 185 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 GOLGA8SH3BPF8 625 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 SMAPO00193 183 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 HMGCRP04035 888 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 CYP2C9P11712 490 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 DARSP14868 501 aaKnown RBP13.61□□□□□ -0.23
LITAF-203ENST00000413364 ATP6V1C1P21283 382 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 COPS2P61201 443 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 PSMC1P62191 440 aaKnown RBP13.61□□□□□ -0.23
LITAF-203ENST00000413364 CALCOCO2Q13137 446 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 CBX3Q13185 183 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 TAF1CQ15572 869 aaPredicted RBP13.61□□□□□ -0.23
LITAF-203ENST00000413364 CNGA2Q16280 664 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 ATP13A4Q4VNC1 1196 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 ZNF365Q70YC5 407 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 CPXM1Q96SM3 734 aa13.61□□□□□ -0.23
LITAF-203ENST00000413364 PI4K2BG5E9Z4 385 aa13.6□□□□□ -0.23
LITAF-203ENST00000413364 WFS1O76024 890 aa13.6□□□□□ -0.23
LITAF-203ENST00000413364 NUDT17P0C025 328 aa13.6□□□□□ -0.23
LITAF-203ENST00000413364 KRT3P12035 628 aa13.6□□□□□ -0.23
LITAF-203ENST00000413364 ITIH2P19823 946 aa13.6□□□□□ -0.23
LITAF-203ENST00000413364 SP100P23497 879 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms