RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 HMGA1P17096 107 aaKnown RBP16.05■□□□□ 0.16
LSM5-207ENST00000410044 SNX16P57768 344 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 RBM10P98175 930 aaKnown RBP16.05■□□□□ 0.16
LSM5-207ENST00000410044 PDCLQ13371 301 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 SLC18A3Q16572 532 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 PM20D1Q6GTS8 502 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 ANKRD54Q6NXT1 300 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 DENND5BQ6ZUT9 1274 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 DNAJB7Q7Z6W7 309 aaPredicted RBP16.05■□□□□ 0.16
LSM5-207ENST00000410044 ITIH5Q86UX2 942 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 PASD1Q8IV76 773 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 C1orf131Q8NDD1 294 aaKnown RBP16.05■□□□□ 0.16
LSM5-207ENST00000410044 PSMG2Q969U7 264 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 PABPC5Q96DU9 382 aaKnown RBP16.05■□□□□ 0.16
LSM5-207ENST00000410044 TRMT2BQ96GJ1 504 aaKnown RBP16.05■□□□□ 0.16
LSM5-207ENST00000410044 SFXN1Q9H9B4 322 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 EHD2Q9NZN4 543 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 NAGPAQ9UK23 515 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 LINC01565O15544 149 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 RTN2O75298 545 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 MMP8P22894 467 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 LTBRP36941 435 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 PTP4A2Q12974 167 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 VEPH1Q14D04 833 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 SDHAF4Q5VUM1 108 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 NAA35Q5VZE5 725 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 LLGL2Q6P1M3 1020 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 SYCE2Q6PIF2 218 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 ERICH1Q86X53 443 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 CCDC112Q8NEF3 446 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 GIPC2Q8TF65 315 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 CPA5Q8WXQ8 436 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 ZNF707Q96C28 371 aaPredicted RBP16.04■□□□□ 0.16
LSM5-207ENST00000410044 PPP1R13BQ96KQ4 1090 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 ZNF512Q96ME7 567 aaPredicted RBP16.04■□□□□ 0.16
LSM5-207ENST00000410044 CPXM1Q96SM3 734 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 LRRC3Q9BY71 257 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 FBXO44Q9H4M3 255 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 LRRC4Q9HBW1 653 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 CNGB3Q9NQW8 809 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 CLEC1BQ9P126 229 aa16.04■□□□□ 0.16
LSM5-207ENST00000410044 NOTCH4Q99466 2003 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.03■□□□□ 0.16
LSM5-207ENST00000410044 CCDC195A0A1B0GUA6 201 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 AKR1B10O60218 316 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 RFPL2O75678 378 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 PTPN2P17706 415 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 SLC5A3P53794 718 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 EPHA5P54756 1037 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 GSCP56915 257 aaPredicted RBP16.03■□□□□ 0.16
LSM5-207ENST00000410044 ZNF268Q14587 947 aaPredicted RBP16.03■□□□□ 0.16
LSM5-207ENST00000410044 PTPN20Q4JDL3 420 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 ALKBH5Q6P6C2 394 aaKnown RBP16.03■□□□□ 0.16
LSM5-207ENST00000410044 GPRIN1Q7Z2K8 1008 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 OVCA2Q8WZ82 227 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.03■□□□□ 0.16
LSM5-207ENST00000410044 MIS12Q9H081 205 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 S1PR5Q9H228 398 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 DEF6Q9H4E7 631 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 AVENQ9NQS1 362 aaPredicted RBP16.03■□□□□ 0.16
LSM5-207ENST00000410044 SEPT11Q9NVA2 429 aaKnown RBP16.03■□□□□ 0.16
LSM5-207ENST00000410044 TAS2R14Q9NYV8 317 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 SCML2Q9UQR0 700 aa16.03■□□□□ 0.16
LSM5-207ENST00000410044 EPN1Q9Y6I3 576 aaPredicted RBP16.03■□□□□ 0.16
LSM5-207ENST00000410044 DOCK6Q96HP0 2047 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 DENND4CQ5VZ89 1909 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 NCANO14594 1321 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 EIF3CLB5ME19 914 aaKnown RBP16.02■□□□□ 0.16
LSM5-207ENST00000410044 XYLBO75191 536 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 FBXO21O94952 628 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 FTLP02792 175 aaPredicted RBP16.02■□□□□ 0.16
LSM5-207ENST00000410044 FOSL2P15408 326 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 YWHAQP27348 245 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 CYLC1P35663 651 aaPredicted RBP16.02■□□□□ 0.16
LSM5-207ENST00000410044 SCNN1AP37088 669 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 NSFP46459 744 aaKnown RBP16.02■□□□□ 0.16
LSM5-207ENST00000410044 PPP3CCP48454 512 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 RGS7P49802 495 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 TKTL1P51854 596 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 USP46P62068 366 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 GFPT1Q06210 699 aaPredicted RBP16.02■□□□□ 0.16
LSM5-207ENST00000410044 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
LSM5-207ENST00000410044 MTMR3Q13615 1198 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 C10orf76Q5T2E6 689 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 MON1BQ7L1V2 547 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 GPR149Q86SP6 731 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 ZDHHC17Q8IUH5 632 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 MCOLN2Q8IZK6 566 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 ELMOD1Q8N336 334 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 LEMD2Q8NC56 503 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 MSANTD4Q8NCY6 345 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 SCAMP5Q8TAC9 235 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 GPR152Q8TDT2 470 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 IRGQQ8WZA9 623 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 MSLNLQ96KJ4 702 aa16.02■□□□□ 0.16
LSM5-207ENST00000410044 EIF3CQ99613 913 aaKnown RBP16.02■□□□□ 0.16
LSM5-207ENST00000410044 UXTQ9UBK9 157 aaPredicted RBP16.02■□□□□ 0.16
LSM5-207ENST00000410044 SOWAHDA6NJG2 315 aa16.01■□□□□ 0.15
LSM5-207ENST00000410044 E5RJQ4 531 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms