RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 COPS2P61201 443 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 RBP5P82980 135 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 RNASELQ05823 741 aaKnown RBP15.03■□□□□ -0
MINDY4-202ENST00000409881 WDR44Q5JSH3 913 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 DUPD1Q68J44 220 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 SPOPLQ6IQ16 392 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 GJB7Q6PEY0 223 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 CRIPAKQ8N1N5 446 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 ERP44Q9BS26 406 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 SEMA4AQ9H3S1 761 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 SIX2Q9NPC8 291 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 FGFR1OP2Q9NVK5 253 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 USP15Q9Y4E8 981 aaPredicted RBP15.03■□□□□ -0
MINDY4-202ENST00000409881 PDCD11Q14690 1871 aaKnown RBP15.03■□□□□ -0
MINDY4-202ENST00000409881 CASTOR2A6NHX0 329 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 TBKBP1A7MCY6 615 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 PPEF2O14830 753 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 INPPL1O15357 1258 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 H2AFZP0C0S5 128 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 CYP3A5P20815 502 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 BLMHQ13867 455 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 CNGA2Q16280 664 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 GALNTL6Q49A17 601 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 PAN2Q504Q3 1202 aaKnown RBP15.03■□□□□ -0
MINDY4-202ENST00000409881 SPDYCQ5MJ68 293 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 H2AFVQ71UI9 128 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 HES6Q96HZ4 224 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 NT5C1BQ96P26 610 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 CCDC134Q9H6E4 229 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 OSGEPQ9NPF4 335 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 TBC1D13Q9NVG8 400 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 ADAM22Q9P0K1 906 aa15.03■□□□□ -0
MINDY4-202ENST00000409881 TCP11X1B4DZS4 312 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 UCHL3P15374 230 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 ATP2A2P16615 1042 aaKnown RBP15.02■□□□□ -0
MINDY4-202ENST00000409881 MSH2P43246 934 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 PDE6CP51160 858 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 NOP14P78316 857 aaKnown RBP15.02■□□□□ -0
MINDY4-202ENST00000409881 ADCY2Q08462 1091 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 ZNF211Q13398 564 aaPredicted RBP15.02■□□□□ -0
MINDY4-202ENST00000409881 ZNF699Q32M78 642 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 DCAF12L1Q5VU92 463 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 C9orf57Q5W0N0 161 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 ZDHHC24Q6UX98 284 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 CXorf38Q8TB03 319 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 DYDC1Q8WWB3 177 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 TOP1MTQ969P6 601 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 CASD1Q96PB1 797 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 CXXC1Q9P0U4 656 aaPredicted RBP15.02■□□□□ -0
MINDY4-202ENST00000409881 KANSL3Q9P2N6 904 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 APEX2Q9UBZ4 518 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 AMFRQ9UKV5 643 aa15.02■□□□□ -0
MINDY4-202ENST00000409881 KLHL33A6NCF5 533 aa15.02□□□□□ -0.01
MINDY4-202ENST00000409881 OAS1P00973 400 aaKnown RBP15.02□□□□□ -0.01
MINDY4-202ENST00000409881 AGTP01019 485 aa15.02□□□□□ -0.01
MINDY4-202ENST00000409881 BNIP1Q12981 228 aa15.02□□□□□ -0.01
MINDY4-202ENST00000409881 SGSM1Q2NKQ1 1148 aa15.02□□□□□ -0.01
MINDY4-202ENST00000409881 ARHGEF19Q8IW93 802 aa15.02□□□□□ -0.01
MINDY4-202ENST00000409881 PPM1KQ8N3J5 372 aa15.02□□□□□ -0.01
MINDY4-202ENST00000409881 HPDLQ96IR7 371 aa15.02□□□□□ -0.01
MINDY4-202ENST00000409881 MLXIPLQ9NP71 852 aa15.02□□□□□ -0.01
MINDY4-202ENST00000409881 ASS1P00966 412 aaKnown RBP15.01□□□□□ -0.01
MINDY4-202ENST00000409881 MAGEA10P43363 369 aaPredicted RBP15.01□□□□□ -0.01
MINDY4-202ENST00000409881 TUSC3Q13454 348 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 TAF11Q15544 211 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 C6orf118Q5T5N4 469 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 TRIM68Q6AZZ1 485 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 PHLDB3Q6NSJ2 640 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 DPY19L2P1Q6NXN4 242 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 ZNF280BQ86YH2 543 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 SYCE1Q8N0S2 351 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 FAM193BQ96PV7 902 aaPredicted RBP15.01□□□□□ -0.01
MINDY4-202ENST00000409881 XYLT2Q9H1B5 865 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 APOBEC3GQ9HC16 384 aaKnown RBP15.01□□□□□ -0.01
MINDY4-202ENST00000409881 UBE2TQ9NPD8 197 aaPredicted RBP15.01□□□□□ -0.01
MINDY4-202ENST00000409881 HOMER3Q9NSC5 361 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 AJAP1Q9UKB5 411 aaPredicted RBP15.01□□□□□ -0.01
MINDY4-202ENST00000409881 DGKIO75912 1065 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 CLCNKBP51801 687 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 JAMLQ86YT9 394 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 PAAF1Q9BRP4 392 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 OSBPL1AQ9BXW6 950 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 ARHGEF3Q9NR81 526 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 HCSTQ9UBK5 93 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 NXF1Q9UBU9 619 aaKnown RBP15.01□□□□□ -0.01
MINDY4-202ENST00000409881 NUB1Q9Y5A7 615 aa15.01□□□□□ -0.01
MINDY4-202ENST00000409881 DDX3XO00571 662 aaKnown RBP eCLIP15□□□□□ -0.01
MINDY4-202ENST00000409881 PODXLO00592 558 aa15□□□□□ -0.01
MINDY4-202ENST00000409881 B4GALT3O60512 393 aa15□□□□□ -0.01
MINDY4-202ENST00000409881 ZC3H11AO75152 810 aaKnown RBP eCLIP15□□□□□ -0.01
MINDY4-202ENST00000409881 DDHD2O94830 711 aa15□□□□□ -0.01
MINDY4-202ENST00000409881 LRPAP1P30533 357 aa15□□□□□ -0.01
MINDY4-202ENST00000409881 ATP11AP98196 1134 aa15□□□□□ -0.01
MINDY4-202ENST00000409881 FITM2Q8N6M3 262 aa15□□□□□ -0.01
MINDY4-202ENST00000409881 HERVK_113Q902F9 699 aa15□□□□□ -0.01
MINDY4-202ENST00000409881 MRPL9Q9BYD2 267 aaKnown RBP15□□□□□ -0.01
MINDY4-202ENST00000409881 DNAJC12Q9UKB3 198 aa15□□□□□ -0.01
MINDY4-202ENST00000409881 GTF3C5Q9Y5Q8 519 aaPredicted RBP15□□□□□ -0.01
MINDY4-202ENST00000409881 BZW2Q9Y6E2 419 aaKnown RBP15□□□□□ -0.01
MINDY4-202ENST00000409881 TDRD15B5MCY1 1934 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms