RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 SMARCD1Q96GM5 515 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 MS4A14Q96JA4 679 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 BTBD6Q96KE9 485 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 TRIM62Q9BVG3 475 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 FRMD8P1Q9BZ68 369 aaPredicted RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 ANKZF1Q9H8Y5 726 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 CRTAC1Q9NQ79 661 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 ST7Q9NRC1 585 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 RRN3Q9NYV6 651 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 STK39Q9UEW8 545 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 CHORDC1Q9UHD1 332 aaPredicted RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 FEZ2Q9UHY8 353 aaPredicted RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 FAM187AA6NFU0 413 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 OR6C75A6NL08 312 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 C2CD4BA6NLJ0 364 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 GOLGA8SH3BPF8 625 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 H7C4K7 107 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 BAIAP3O94812 1187 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 PYGMP11217 842 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 CCDC130P13994 396 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 ADORA2BP29275 332 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 CHRNA3P32297 505 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 CYP2C18P33260 490 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 PTPN9P43378 593 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 OR1G1P47890 313 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 CCL23P55773 120 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 MRPL58Q14197 206 aaKnown RBP10.28□□□□□ -0.76
POLR1A-202ENST00000409024 NFE2Q16621 373 aaPredicted RBP10.28□□□□□ -0.76
POLR1A-202ENST00000409024 MAP9Q49MG5 647 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 BOLA3Q53S33 107 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 C2CD6Q53TS8 623 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 MDH1BQ5I0G3 518 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 TMEM31Q5JXX7 168 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 C8orf74Q6P047 294 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 FAM183BPQ6ZVS7 135 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 PAQR9Q6ZVX9 377 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 BEND5Q7L4P6 421 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 FAM35AQ86V20 835 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 ZNF280BQ86YH2 543 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 SLC13A5Q86YT5 568 aaPredicted RBP10.28□□□□□ -0.76
POLR1A-202ENST00000409024 LRRC43Q8N309 656 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 TMEM199Q8N511 208 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 C12orf50Q8NA57 414 aaPredicted RBP10.28□□□□□ -0.76
POLR1A-202ENST00000409024 IRGQQ8WZA9 623 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 TIFAQ96CG3 184 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 FUBP3Q96I24 572 aaKnown RBP eCLIP10.28□□□□□ -0.76
POLR1A-202ENST00000409024 CEP295NLQ96MC4 621 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 TBCBQ99426 244 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 PKMYT1Q99640 499 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 PAAF1Q9BRP4 392 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 MED10Q9BTT4 135 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 B3GNT5Q9BYG0 378 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 PARD6BQ9BYG5 372 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 TRIM7Q9C029 511 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 NRDE2Q9H7Z3 1164 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 PRDM16Q9HAZ2 1276 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 LRRC4Q9HBW1 653 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 CNGB3Q9NQW8 809 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 METTL5Q9NRN9 209 aaKnown RBP10.28□□□□□ -0.76
POLR1A-202ENST00000409024 RBM12Q9NTZ6 932 aaKnown RBP10.28□□□□□ -0.76
POLR1A-202ENST00000409024 ADAM28Q9UKQ2 775 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 FAN1Q9Y2M0 1017 aa10.28□□□□□ -0.76
POLR1A-202ENST00000409024 SF3B1O75533 1304 aaKnown RBP eCLIP10.28□□□□□ -0.765e-10■■■■■ 55.1
POLR1A-202ENST00000409024 CACNA1AO00555 2505 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 ZNF487B1APH4 448 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 F8VP50 259 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 NRP1O14786 923 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 PAPSS1O43252 624 aaPredicted RBP10.27□□□□□ -0.77
POLR1A-202ENST00000409024 HSF2BPO75031 334 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 PHF2O75151 1096 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 AMHP03971 560 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 PDGFRAP16234 1089 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 TKTP29401 623 aaKnown RBP10.27□□□□□ -0.77
POLR1A-202ENST00000409024 SDC4P31431 198 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 GBP1P32455 592 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 BRCC3P46736 316 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 FNTAP49354 379 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 DNA2P51530 1060 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 OGDHQ02218 1023 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 C2orf54Q08AI8 447 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 ZNF252P-AS1Q0IIN9 211 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 DHX34Q14147 1143 aaKnown RBP10.27□□□□□ -0.77
POLR1A-202ENST00000409024 CCDC85BQ15834 202 aaPredicted RBP10.27□□□□□ -0.77
POLR1A-202ENST00000409024 ODF2Q5BJF6 829 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 RAB41Q5JT25 222 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 KIAA0319Q5VV43 1072 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 MFSD5Q6N075 450 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 LLGL2Q6P1M3 1020 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 CLEC20AQ6ZU45 233 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 SYDE1Q6ZW31 735 aaPredicted RBP10.27□□□□□ -0.77
POLR1A-202ENST00000409024 STRADAQ7RTN6 431 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 PHLDB2Q86SQ0 1253 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 PIGZQ86VD9 579 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 PSTKQ8IV42 348 aaKnown RBP10.27□□□□□ -0.77
POLR1A-202ENST00000409024 IFT20Q8IY31 132 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 CMASQ8NFW8 434 aaPredicted RBP10.27□□□□□ -0.77
POLR1A-202ENST00000409024 JOSD2Q8TAC2 188 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 C2orf15Q8WU43 125 aaKnown RBP10.27□□□□□ -0.77
POLR1A-202ENST00000409024 TEKT4Q8WW24 435 aa10.27□□□□□ -0.77
POLR1A-202ENST00000409024 RXFP2Q8WXD0 754 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms