RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 ZNF840PA6NDX5 716 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 LRRIQ3A6PVS8 624 aaPredicted RBP13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 APBB3O95704 486 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 ASS1P00966 412 aaKnown RBP13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 CST3P01034 146 aaPredicted RBP13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 C4BPAP04003 597 aaKnown RBP13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 APODP05090 189 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 MBL2P11226 248 aaPredicted RBP13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 PRKCSHP14314 528 aaPredicted RBP13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 GJA4P35212 333 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 WNT7BP56706 349 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 MRPS21P82921 87 aaKnown RBP13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 TAF10Q12962 218 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 ADAM9Q13443 819 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 FAM35AQ86V20 835 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 CRYBG2Q8N1P7 616 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 C12orf50Q8NA57 414 aaPredicted RBP13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 SPRYD3Q8NCJ5 442 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 KIAA0895Q8NCT3 520 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 GLIS3Q8NEA6 775 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 ZSWIM2Q8NEG5 633 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 NETO1Q8TDF5 533 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 GAB3Q8WWW8 586 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 RSPRY1Q96DX4 576 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 MRPL45Q9BRJ2 306 aaKnown RBP13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 NIF3L1Q9GZT8 377 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 TMEM8AQ9HCN3 771 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 GCNT4Q9P109 453 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 ZNF510Q9Y2H8 683 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 TRIOO75962 3097 aa13.63□□□□□ -0.23
SNORD88B-201ENST00000408454 ZFHX2Q9C0A1 2572 aaPredicted RBP13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 LEFTY2O00292 366 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 PSMA7O14818 248 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 KLRC4O43908 158 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 ATP2C2O75185 946 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 RPP40O75818 363 aaKnown RBP13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 AP1G2O75843 785 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 ZNF202O95125 648 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 OLFM2O95897 454 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 RALAP11233 206 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 SOX9P48436 509 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 GPR15P49685 360 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 DGKEP52429 567 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 SATB1Q01826 763 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 GAD2Q05329 585 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 LRRC63Q05C16 580 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 TNK2Q07912 1038 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 CSRP2Q16527 193 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 EML3Q32P44 896 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 USP39Q53GS9 565 aaKnown RBP13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 EOGTQ5NDL2 527 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 SDHAF4Q5VUM1 108 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 SNX30Q5VWJ9 437 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 SDE2Q6IQ49 451 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 SV2AQ7L0J3 742 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 SPACA7Q96KW9 195 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 XPO6Q96QU8 1125 aaKnown RBP13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 SMG9Q9H0W8 520 aaKnown RBP13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 METTL14Q9HCE5 456 aaKnown RBP13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 POLMQ9NP87 494 aaPredicted RBP13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 HPS4Q9NQG7 708 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 KRT82Q9NSB4 513 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 CCL26Q9Y258 94 aa13.62□□□□□ -0.23
SNORD88B-201ENST00000408454 COL4A2P08572 1712 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 AXIN1O15169 862 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 SLC16A3O15427 465 aaKnown RBP13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 RNF40O75150 1001 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 OAS1P00973 400 aaKnown RBP13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 ATP5C1P36542 298 aaKnown RBP13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 MXI1P50539 228 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 NDUFA8P51970 172 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 FKBP3Q00688 224 aaKnown RBP13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 INCA1Q0VD86 236 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 DPYDQ12882 1025 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 IFRD2Q12894 506 aaPredicted RBP13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 COBLL1Q53SF7 1204 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 KLHDC10Q6PID8 442 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 TSSK4Q6SA08 328 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 FBXL13Q8NEE6 735 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 TSTD1Q8NFU3 115 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 TTC8Q8TAM2 541 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 SMARCE1Q969G3 411 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 TIGD1Q96MW7 591 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 PNKPQ96T60 521 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 ZNF518BQ9C0D4 1074 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 WDR35Q9P2L0 1181 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 EBF1Q9UH73 591 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 CPQQ9Y646 472 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 DOCK6Q96HP0 2047 aa13.61□□□□□ -0.23
SNORD88B-201ENST00000408454 C2orf78A6NCI8 922 aa13.6□□□□□ -0.23
SNORD88B-201ENST00000408454 TADA3O75528 432 aa13.6□□□□□ -0.23
SNORD88B-201ENST00000408454 FGFR1OPO95684 399 aaKnown RBP13.6□□□□□ -0.23
SNORD88B-201ENST00000408454 HLA-DRAP01903 254 aa13.6□□□□□ -0.23
SNORD88B-201ENST00000408454 ADH5P11766 374 aa13.6□□□□□ -0.23
SNORD88B-201ENST00000408454 TDGF1P13385 188 aa13.6□□□□□ -0.23
SNORD88B-201ENST00000408454 TBXAS1P24557 533 aaPredicted RBP13.6□□□□□ -0.23
SNORD88B-201ENST00000408454 GRIA2P42262 883 aa13.6□□□□□ -0.23
SNORD88B-201ENST00000408454 TNFRSF4P43489 277 aa13.6□□□□□ -0.23
SNORD88B-201ENST00000408454 FNTBP49356 437 aa13.6□□□□□ -0.23
SNORD88B-201ENST00000408454 GALK1P51570 392 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms