RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 HLA-DRAP01903 254 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 P4HA1P13674 534 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 HDCP19113 662 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 GJA4P35212 333 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 PPP3CCP48454 512 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 IFNAR2P48551 515 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 VAMP7P51809 220 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 ZXDBP98169 803 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 GRSF1Q12849 480 aaKnown RBP eCLIP16.33■□□□□ 0.2
TPM1-207ENST00000403994 IFRD2Q12894 506 aaPredicted RBP16.33■□□□□ 0.2
TPM1-207ENST00000403994 TAF10Q12962 218 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 ORC1Q13415 861 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 SGSM1Q2NKQ1 1148 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 SPOPLQ6IQ16 392 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 PAQR9Q6ZVX9 377 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 INTS8Q75QN2 995 aaKnown RBP16.33■□□□□ 0.2
TPM1-207ENST00000403994 FAM186BQ8IYM0 893 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 TAF4BQ92750 862 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 SMARCD1Q96GM5 515 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 SLITRK1Q96PX8 696 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 DMAP1Q9NPF5 467 aaPredicted RBP16.33■□□□□ 0.2
TPM1-207ENST00000403994 CHURC1-FNTBB4DL54 471 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 LEFTY2O00292 366 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 EGFP01133 1207 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 CCDC130P13994 396 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 HOXC13P31276 330 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 FNTBP49356 437 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 NDST1P52848 882 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 SLC5A3P53794 718 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 SLC7A9P82251 487 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 ACOT1Q86TX2 421 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 SMYD4Q8IYR2 804 aaPredicted RBP16.32■□□□□ 0.2
TPM1-207ENST00000403994 FUKQ8N0W3 1084 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 KCNK16Q96T55 309 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 P2RY13Q9BPV8 354 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 MED10Q9BTT4 135 aa16.32■□□□□ 0.2
TPM1-207ENST00000403994 TNFRSF10BO14763 440 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 AP1G2O75843 785 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 RTN3O95197 1032 aaPredicted RBP16.31■□□□□ 0.2
TPM1-207ENST00000403994 YWHAQP27348 245 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 GCLMP48507 274 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 AMPD2Q01433 879 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 ENPEPQ07075 957 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 PPP3CAQ08209 521 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 INCA1Q0VD86 236 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 PNOCQ13519 176 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 BECN1Q14457 450 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 FMR1NBQ8N0W7 255 aaPredicted RBP16.31■□□□□ 0.2
TPM1-207ENST00000403994 NUP93Q8N1F7 819 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 TAS1R2Q8TE23 839 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 OVCA2Q8WZ82 227 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 FBXO32Q969P5 355 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 IMPG2Q9BZV3 1241 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 RNF38Q9H0F5 515 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 APOBEC3GQ9HC16 384 aaKnown RBP16.31■□□□□ 0.2
TPM1-207ENST00000403994 FBRSL1Q9HCM7 1045 aaKnown RBP16.31■□□□□ 0.2
TPM1-207ENST00000403994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.2
TPM1-207ENST00000403994 FAM49BQ9NUQ9 324 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 SMPD4Q9NXE4 827 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 CPQQ9Y646 472 aa16.31■□□□□ 0.2
TPM1-207ENST00000403994 RNF40O75150 1001 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 NFATC1O95644 943 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 ABL1P00519 1130 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 KRT13P13646 458 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 DRD1P21728 446 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 RPL13P26373 211 aaKnown RBP16.3■□□□□ 0.2
TPM1-207ENST00000403994 HOXA6P31267 233 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 ID4P47928 161 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 LPAL2Q16609 132 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 EDRF1Q3B7T1 1238 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 HEATR6Q6AI08 1181 aaKnown RBP16.3■□□□□ 0.2
TPM1-207ENST00000403994 LONP2Q86WA8 852 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 UNC93AQ86WB7 457 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 PDZD8Q8NEN9 1154 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 ZMIZ2Q8NF64 920 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 SCAMP5Q8TAC9 235 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 SLC2A14Q8TDB8 520 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 EZH1Q92800 747 aaPredicted RBP16.3■□□□□ 0.2
TPM1-207ENST00000403994 CCDC34Q96HJ3 373 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 TWNKQ96RR1 684 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 SMOQ99835 787 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 NIF3L1Q9GZT8 377 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 LINC00597Q9H2U6 94 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 NCOR2Q9Y618 2525 aa16.3■□□□□ 0.2
TPM1-207ENST00000403994 SCAMP3O14828 347 aaKnown RBP16.29■□□□□ 0.2
TPM1-207ENST00000403994 CYP17A1P05093 508 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 PSMC2P35998 433 aaKnown RBP16.29■□□□□ 0.2
TPM1-207ENST00000403994 GALK1P51570 392 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 SRSF5Q13243 272 aaKnown RBP16.29■□□□□ 0.2
TPM1-207ENST00000403994 ADAM9Q13443 819 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 GAB4Q2WGN9 574 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 LAIR1Q6GTX8 287 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 PRR23BQ6ZRT6 265 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 FILIP1Q7Z7B0 1213 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 CRYBG2Q8N1P7 616 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 KIAA1958Q8N8K9 716 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 C12orf29Q8N999 325 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 CD101Q93033 1021 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 SECISBP2LQ93073 1101 aaKnown RBP16.29■□□□□ 0.2
TPM1-207ENST00000403994 EXOC4Q96A65 974 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms