RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MAGEC2Q9UBF1 373 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 HMGXB4Q9UGU5 601 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 CCL26Q9Y258 94 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 FRMD4BQ9Y2L6 1034 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 SIT1Q9Y3P8 196 aa6.15□□□□□ -1.42
HMGB1P20-201ENST00000402555 KIF26AQ9ULI4 1882 aaPredicted RBP6.15□□□□□ -1.43
HMGB1P20-201ENST00000402555 ANAPC1Q9H1A4 1944 aa6.15□□□□□ -1.43
HMGB1P20-201ENST00000402555 C2orf78A6NCI8 922 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 FAM170BA6NMN3 283 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 F8VP50 259 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 ARNTLO00327 626 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 BIN1O00499 593 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZNF263O14978 683 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 KINO60870 393 aaKnown RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 NOL4O94818 638 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 SMC2O95347 1197 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 FGF19O95750 216 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 KRT13P13646 458 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 CCDC130P13994 396 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 RPL13P26373 211 aaKnown RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 VARSP26640 1264 aaKnown RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 ANXA13P27216 316 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 ATICP31939 592 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 PSMC2P35998 433 aaKnown RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 MAGEA11P43364 429 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 ASPAP45381 313 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 MRE11P49959 708 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 AP3M2P53677 418 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 PRKCQQ04759 706 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 TNK2Q07912 1038 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 IFRD2Q12894 506 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 ANGPT1Q15389 498 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 NFIL3Q16649 462 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 SGSM1Q2NKQ1 1148 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 LINC01559Q495D7 138 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZNF658Q5TYW1 1059 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 ANKRD40Q6AI12 368 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 INTS8Q75QN2 995 aaKnown RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 FRMD5Q7Z6J6 570 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 ACOT1Q86TX2 421 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 CMTM8Q8IZV2 173 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 B3GALNT2Q8NCR0 500 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 SPATA20Q8TB22 786 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 TAS1R2Q8TE23 839 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 TMEM174Q8WUU8 243 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 DEPDC1BQ8WUY9 529 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 MRPS31Q92665 395 aaKnown RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 SEMA4DQ92854 862 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 DNASE1L2Q92874 299 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 IRF7Q92985 503 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 USP13Q92995 863 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 CCDC34Q96HJ3 373 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 FUBP3Q96I24 572 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 SHDQ96IW2 340 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 TIGD1Q96MW7 591 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 GSDMAQ96QA5 445 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 TWNKQ96RR1 684 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 SLC22A12Q96S37 553 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 CYP2S1Q96SQ9 504 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 PRRX2Q99811 253 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 MED10Q9BTT4 135 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 DDX23Q9BUQ8 820 aaKnown RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 VRTNQ9H8Y1 702 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 APOBEC3GQ9HC16 384 aaKnown RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 FAM49BQ9NUQ9 324 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 RMND1Q9NWS8 449 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 GTSE1Q9NYZ3 720 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 MAN1B1Q9UKM7 699 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 NDRG2Q9UN36 371 aaKnown RBP6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 WASF2Q9Y6W5 498 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 PIAS3Q9Y6X2 628 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 MYH10P35580 1976 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 ATG2BQ96BY7 2078 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 OTOGLQ3ZCN5 2332 aa6.14□□□□□ -1.43
HMGB1P20-201ENST00000402555 MYO15AQ9UKN7 3530 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 CEP250Q9BV73 2442 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 DMDP11532 3685 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 SCAMP3O14828 347 aaKnown RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 IKBKBO14920 756 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 CETN3O15182 167 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 MAPK13O15264 365 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 CHADO15335 359 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 WIPF1O43516 503 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 F12P00748 615 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 ASS1P00966 412 aaKnown RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 FAM163BP0C2L3 166 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 EPB41P11171 864 aaKnown RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 ARSAP15289 507 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 CD58P19256 250 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 BMP6P22004 513 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 CCNE1P24864 410 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 ADORA2BP29275 332 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 AVPR1AP37288 418 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 KPNA1P52294 538 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 NDST1P52848 882 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 NOP14P78316 857 aaKnown RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 FCHO2Q0JRZ9 810 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 FZD5Q13467 585 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 MAPRE1Q15691 268 aaKnown RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 EDRF1Q3B7T1 1238 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms