RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 CDH16O75309 829 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 HARSP12081 509 aaKnown RBP16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 NOP14P78316 857 aaKnown RBP16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 DEFB128Q7Z7B8 93 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 THNSL1Q8IYQ7 743 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RCOR2Q8IZ40 523 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CKAP2Q8WWK9 683 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 DPF3Q92784 378 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RBM41Q96IZ5 413 aaKnown RBP16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PLCD4Q9BRC7 762 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TSPYL2Q9H2G4 693 aaPredicted RBP16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 FAM105AQ9NUU6 356 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 USP15Q9Y4E8 981 aaPredicted RBP16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PFKMP08237 780 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CFHP08603 1231 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 KLRC2P26717 231 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 GRM5P41594 1212 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 VPS41P49754 854 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RAB27AP51159 221 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ZNF132P52740 706 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 AP3M2P53677 418 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SEZ6Q53EL9 994 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ZBTB41Q5SVQ8 909 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 HIBCHQ6NVY1 386 aaPredicted RBP16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 DRICH1Q6PGQ1 229 aaPredicted RBP16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SLC24A5Q71RS6 500 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RIBC1Q8N443 379 aaPredicted RBP16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ZCCHC9Q8N567 271 aaKnown RBP16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CEP120Q8N960 986 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SMG8Q8ND04 991 aaKnown RBP16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 MAGEC3Q8TD91 643 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 FAM212AQ96EL1 285 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 USTQ9Y2C2 406 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 IPPQ9Y573 584 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TET1Q8NFU7 2136 aa16.71■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CFAP73A6NFT4 308 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TCP11X1B4DZS4 312 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 O00370 1275 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 ENPP3O14638 875 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 SUN1O94901 812 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 CALB1P05937 261 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 STAG3L1P0CL83 205 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 SKIP12755 728 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 BRAFP15056 766 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 CD58P19256 250 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 MMP8P22894 467 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TNFSF9P41273 254 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 SSR1P43307 286 aaKnown RBP16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 FAM189BP81408 668 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TCTN1Q2MV58 587 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 LRRC38Q5VT99 294 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 DAB2IPQ5VWQ8 1189 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 SMYD5Q6GMV2 418 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 CNKSR3Q6P9H4 555 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 GSTA5Q7RTV2 222 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 MRPL10Q7Z7H8 261 aaKnown RBP16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 MGARPQ8TDB4 240 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 LINC01599Q8WXQ3 324 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 IMPG2Q9BZV3 1241 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 KCNK9Q9NPC2 374 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 DNAJC17Q9NVM6 304 aaKnown RBP16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 NUB1Q9Y5A7 615 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 C9IYK1 514 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 NDC80O14777 642 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 LSM8O95777 96 aaKnown RBP16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 RDXP35241 583 aaKnown RBP16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 OSTNP61366 133 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 NCOA4Q13772 614 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 LRRC14Q15048 493 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 PPP1R21Q6ZMI0 780 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 ARHGEF18Q6ZSZ5 1173 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 CCDC91Q7Z6B0 441 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 UBR7Q8N806 425 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 BADQ92934 168 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 ACAP3Q96P50 834 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 NXF3Q9H4D5 531 aaKnown RBP16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 NKIRAS1Q9NYS0 192 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 CTNNAL1Q9UBT7 734 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 HES2Q9Y543 173 aa16.7■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TMEM191CA6NGB0 347 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 LIASO43766 372 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TJP3O95049 919 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 PTPN7P35236 360 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 GJC1P36383 396 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 COPS2P61201 443 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 NR1H3Q13133 447 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 IKBKEQ14164 716 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 GBP7Q8N8V2 638 aaPredicted RBP16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 ANKRD42Q8N9B4 389 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 CFAP57Q96MR6 1250 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TTC25Q96NG3 672 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 IL23AQ9NPF7 189 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 FGFR1OP2Q9NVK5 253 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 SNTG2Q9NY99 539 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 NAALADL1Q9UQQ1 740 aa16.69■□□□□ 0.26
CHRFAM7A-203ENST00000401522 MGRN1O60291 552 aa16.68■□□□□ 0.26
CHRFAM7A-203ENST00000401522 CREB1P16220 341 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms