RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 NIF3L1Q9GZT8 377 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 MSH4O15457 936 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 CSF1RP07333 972 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 GHRP10912 638 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 ACADSBP45954 432 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 NFIAQ12857 509 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 DDI2Q5TDH0 399 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 PALB2Q86YC2 1186 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 CENPLQ8N0S6 344 aaPredicted RBP14.24□□□□□ -0.13
VAPA-202ENST00000400000 SERAC1Q96JX3 654 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 PNMA5Q96PV4 448 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 BPIFA3Q9BQP9 254 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 PAK5Q9P286 719 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 RFC5P40937 340 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 SEC24CP53992 1094 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 BEX3Q00994 111 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 EPS8L3Q8TE67 593 aaKnown RBP14.23□□□□□ -0.13
VAPA-202ENST00000400000 PHF21BQ96EK2 531 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 RANBP17Q9H2T7 1088 aaKnown RBP14.23□□□□□ -0.13
VAPA-202ENST00000400000 ATXN3LQ9H3M9 355 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 IGSF9BQ9UPX0 1349 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 KLRC1P26715 233 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 TKFCQ3LXA3 575 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 PRAMEF19Q5SWL8 479 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 P3H2Q8IVL5 708 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 SLC9A8Q9Y2E8 581 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 A0A087WZ62 844 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 ENO4A6NNW6 628 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 OXCT1P55809 520 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 CUL2Q13617 745 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 BARGINQ6ZT62 677 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 TRPC4APQ8TEL6 797 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 FAM172AQ8WUF8 416 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 FDXACB1Q9BRP7 624 aaPredicted RBP14.23□□□□□ -0.13
VAPA-202ENST00000400000 PRMT7Q9NVM4 692 aaPredicted RBP14.23□□□□□ -0.13
VAPA-202ENST00000400000 CPSF1Q10570 1443 aaKnown RBP14.23□□□□□ -0.13
VAPA-202ENST00000400000 RNASEH1O60930 286 aaKnown RBP14.23□□□□□ -0.13
VAPA-202ENST00000400000 SRGNP10124 158 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 C7orf25Q9BPX7 421 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 PACSIN1Q9BY11 444 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 STN1Q9H668 368 aaKnown RBP14.23□□□□□ -0.13
VAPA-202ENST00000400000 IMPAD1Q9NX62 359 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 KDM6AO15550 1401 aaPredicted RBP14.23□□□□□ -0.13
VAPA-202ENST00000400000 RRN3P2A6NIE6 340 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 CCNT2O60583 730 aaKnown RBP14.23□□□□□ -0.13
VAPA-202ENST00000400000 RHOCP08134 193 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 RHOAP61586 193 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 PTK6Q13882 451 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 SLC29A2Q14542 456 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 PDIA5Q14554 519 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 SLC47A2Q86VL8 602 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 ZNF786Q8N393 782 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 TMEM121Q9BTD3 319 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 ARL2BPQ9Y2Y0 163 aa14.23□□□□□ -0.13
VAPA-202ENST00000400000 E9PBE3 544 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 ENO2P09104 434 aaPredicted RBP14.22□□□□□ -0.13
VAPA-202ENST00000400000 FLT3P36888 993 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 CNTN1Q12860 1018 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 CSHL1Q14406 222 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 TRADDQ15628 312 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 RBM23Q86U06 439 aaKnown RBP14.22□□□□□ -0.13
VAPA-202ENST00000400000 PCYOX1LQ8NBM8 494 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 AHCYL2Q96HN2 611 aaKnown RBP14.22□□□□□ -0.13
VAPA-202ENST00000400000 KCNF1Q9H3M0 494 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 TECPR2O15040 1411 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 GMFGO60234 142 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 MED24O75448 989 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 FAM107AO95990 144 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 FYNP06241 537 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 PYGMP11217 842 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 GARTP22102 1010 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 NOL9Q5SY16 702 aaKnown RBP14.22□□□□□ -0.13
VAPA-202ENST00000400000 LPCAT1Q8NF37 534 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 E2F7Q96AV8 911 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 DEPDC7Q96QD5 511 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 ATP6V1HQ9UI12 483 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 PLA2G6O60733 806 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 VPS26AO75436 327 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 SNRPAP09012 282 aaKnown RBP14.22□□□□□ -0.13
VAPA-202ENST00000400000 ATP6V1B2P21281 511 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 KCNA3P22001 575 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 POU6F1Q14863 301 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 ACOX1Q15067 660 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 TRAF7Q6Q0C0 670 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 LUZP2Q86TE4 346 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 RDM1Q8NG50 284 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 BCL2L14Q9BZR8 327 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 ZMYM5Q9UJ78 669 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 PCDHB12Q9Y5F1 795 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 PCDHGA4Q9Y5G9 962 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 DUSP10Q9Y6W6 482 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 GUCA1AP43080 201 aaPredicted RBP14.22□□□□□ -0.13
VAPA-202ENST00000400000 GCLCP48506 637 aaPredicted RBP14.22□□□□□ -0.13
VAPA-202ENST00000400000 ALX1Q15699 326 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 ADSSL1Q8N142 457 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 USP13Q92995 863 aaPredicted RBP14.22□□□□□ -0.13
VAPA-202ENST00000400000 TPD52L3Q96J77 140 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 SEC16BQ96JE7 1060 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 CXCL8P10145 99 aa14.22□□□□□ -0.13
VAPA-202ENST00000400000 YWHAZP63104 245 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms