RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PGAP3Q96FM1 320 aaPredicted RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 NAP1L5Q96NT1 182 aaPredicted RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 NCAPGQ9BPX3 1015 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 SLC2A4RGQ9NR83 387 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 TLR8Q9NR97 1041 aaKnown RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 ABI2Q9NYB9 513 aaPredicted RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 ZNF510Q9Y2H8 683 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 PRRC2BQ5JSZ5 2229 aaKnown RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 FOXN3O00409 490 aaPredicted RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 TPM1P09493 284 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 MYBL1P10243 752 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 PLCB2Q00722 1185 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 C1QBPQ07021 282 aaKnown RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 GOLGA7BQ2TAP0 167 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 RARS2Q5T160 578 aaKnown RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 C10orf76Q5T2E6 689 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 PDZD4Q76G19 769 aaPredicted RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 TMEM150AQ86TG1 271 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 TTC30AQ86WT1 665 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 TMEM130Q8N3G9 435 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 TDRD5Q8NAT2 981 aaKnown RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 ATAD1Q8NBU5 361 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 TMEM35BQ8NCS4 154 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 IER2Q9BTL4 223 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 MMRN2Q9H8L6 949 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 ARHGAP26Q9UNA1 814 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 CXorf51AA0A1B0GTR3 108 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 PER2O15055 1255 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 ATP2C2O75185 946 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 SERPING1P05155 500 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 UNGP13051 313 aaPredicted RBP7.93□□□□□ -1.14
USP16-204ENST00000399976 BDNFP23560 247 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 ACAT1P24752 427 aaKnown RBP7.93□□□□□ -1.14
USP16-204ENST00000399976 CYP2F1P24903 491 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 SLC5A3P53794 718 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 POLR2FP61218 127 aaKnown RBP7.93□□□□□ -1.14
USP16-204ENST00000399976 PSMC1P62191 440 aaKnown RBP7.93□□□□□ -1.14
USP16-204ENST00000399976 CYP27A1Q02318 531 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 RING1Q06587 406 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 DLX2Q07687 328 aaPredicted RBP7.93□□□□□ -1.14
USP16-204ENST00000399976 MGAT5BQ3V5L5 792 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 RRAGAQ7L523 313 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 BHLHA9Q7RTU4 235 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 UBALD2Q8IYN6 164 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 OLIG1Q8TAK6 271 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 TFAP2BQ92481 460 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 SPAG5Q96R06 1193 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 ZSWIM1Q9BR11 485 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 XPO4Q9C0E2 1151 aaKnown RBP7.93□□□□□ -1.14
USP16-204ENST00000399976 IFNKQ9P0W0 207 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 AJAP1Q9UKB5 411 aaPredicted RBP7.93□□□□□ -1.14
USP16-204ENST00000399976 INTUQ9ULD6 942 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 HBS1LQ9Y450 684 aaKnown RBP7.93□□□□□ -1.14
USP16-204ENST00000399976 NYNRINQ9P2P1 1898 aaKnown RBP7.93□□□□□ -1.14
USP16-204ENST00000399976 RBAK-RBAKDNI3L0D1 243 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 TEX33O43247 280 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 LRRN2O75325 713 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 TADA3O75528 432 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 LCA5LO95447 670 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 PDGFRBP09619 1106 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 OR4Q2P0C623 313 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 USP17L7P0C7H9 530 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 GTF2F1P35269 517 aaKnown RBP eCLIP7.93□□□□□ -1.14
USP16-204ENST00000399976 GRIK1P39086 918 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 NUBP1P53384 320 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 NOMO3P69849 1222 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 SFMBT2Q5VUG0 894 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 RNF43Q68DV7 783 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 SLC26A9Q7LBE3 791 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 BNIPLQ7Z465 357 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 FAM217AQ8IXS0 508 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 SLC30A5Q8TAD4 765 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 SHKBP1Q8TBC3 707 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 KAT5Q92993 513 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 FAM84AQ96KN4 292 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 SLC2A13Q96QE2 648 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 PANX2Q96RD6 677 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 MED10Q9BTT4 135 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 TRPM5Q9NZQ8 1165 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 STOML2Q9UJZ1 356 aa7.93□□□□□ -1.14
USP16-204ENST00000399976 ZNF840PA6NDX5 716 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 GYPCP04921 128 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 CALB1P05937 261 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 CCDC130P13994 396 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 CD58P19256 250 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 ZNF75DP51815 510 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 DAOAP59103 153 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 FCHO2Q0JRZ9 810 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 EIF4EBP2Q13542 120 aaPredicted RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 HTR4Q13639 388 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 EFHC1Q5JVL4 640 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 CACNA2D4Q7Z3S7 1137 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 NPAS3Q8IXF0 933 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 MRPS31Q92665 395 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 FAM161BQ96MY7 647 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 SEPT5Q99719 369 aaPredicted RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 CRACR2AQ9BSW2 395 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 RBSNQ9H1K0 784 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 POMKQ9H5K3 350 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 ABCC13Q9NSE7 274 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms