RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 ZNF467Q7Z7K2 595 aaPredicted RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 LONP2Q86WA8 852 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ZNF677Q86XU0 584 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 FBXL16Q8N461 479 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 DAGLBQ8NCG7 672 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 AGBL3Q8NEM8 1001 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 CHST13Q8NET6 341 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ADAM32Q8TC27 787 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 DNAJB3Q8WWF6 145 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 MTMR8Q96EF0 704 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 PGLYRP2Q96PD5 576 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SLITRK1Q96PX8 696 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ASPSCR1Q9BZE9 553 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 YIPF3Q9GZM5 350 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 CASS4Q9NQ75 786 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SPATS2LQ9NUQ6 558 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 ARHGEF38Q9NXL2 777 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SNTG2Q9NY99 539 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.38□□□□□ -1.87
KNL1-202ENST00000399668 MED1Q15648 1581 aaPredicted RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 RIC1Q4ADV7 1423 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 RRN3P2A6NIE6 340 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SUPT3HB4E1H0 165 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 FOXP2O15409 715 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SUPT3HO75486 399 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ACO1P21399 889 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 MUTP22033 750 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ACADSBP45954 432 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 GLRBP48167 497 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 PPP3CCP48454 512 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 DGKZQ13574 1117 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 CBWD6Q4V339 395 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 CBWD3Q5JTY5 395 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 RABGAP1LQ5R372 815 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 CBWD5Q5RIA9 395 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 LAYNQ6UX15 382 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ANO5Q75V66 913 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SLFN11Q7Z7L1 901 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 LRRC6Q86X45 466 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 STKLD1Q8NE28 680 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 CHST12Q9NRB3 414 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ADARB2Q9NS39 739 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 NDE1Q9NXR1 346 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 STX18Q9P2W9 335 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 SAE1Q9UBE0 346 aaPredicted RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 DMGDHQ9UI17 866 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 SLC39A10Q9ULF5 831 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 PRG3Q9Y2Y8 225 aaPredicted RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 LOC100653049A0A140TA62 436 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 PJA2O43164 708 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 KRT34O76011 436 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 MICAL2O94851 1124 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SLITRK3O94933 977 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ASMTLO95671 621 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 AGTP01019 485 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 IL1R1P14778 569 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 RPS12P25398 132 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 SNRPFP62306 86 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 KCNMA1Q12791 1236 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 OVGP1Q12889 678 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 PDK1Q15118 436 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SLC15A2Q16348 729 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 Q4G0T1 1027 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ZRANB3Q5FWF4 1079 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 AADACL2Q6P093 401 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 DENND5BQ6ZUT9 1274 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.38□□□□□ -1.87
KNL1-202ENST00000399668 PTF1AQ7RTS3 328 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ERO1BQ86YB8 467 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SLC13A5Q86YT5 568 aaPredicted RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 FBXO25Q8TCJ0 367 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 BLOC1S5Q8TDH9 187 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 GIPC2Q8TF65 315 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 HDAC7Q8WUI4 952 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 TRAPPC12Q8WVT3 735 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 CYGBQ8WWM9 190 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SEMA4DQ92854 862 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 ZNF669Q96BR6 464 aaPredicted RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 CMTM5Q96DZ9 223 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 FAM111AQ96PZ2 611 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 PARK7Q99497 189 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 CEP41Q9BYV8 373 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 PABPC3Q9H361 631 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 KDM4CQ9H3R0 1056 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 MANSC1Q9H8J5 431 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 CYP4F12Q9HCS2 524 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SETD4Q9NVD3 440 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 WHRNQ9P202 907 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 SMG5Q9UPR3 1016 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 CLCA2Q9UQC9 943 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 THADAQ6YHU6 1953 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 A0A087WZ62 844 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 DPYSL4O14531 572 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 PIAS1O75925 651 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 DNAJC8O75937 253 aaPredicted RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 TMCC1O94876 653 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 SNRPAP09012 282 aaKnown RBP3.38□□□□□ -1.87
KNL1-202ENST00000399668 CETPP11597 493 aa3.38□□□□□ -1.87
KNL1-202ENST00000399668 CCDC130P13994 396 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms