RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 PHTF2Q8N3S3 785 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 SPATA17Q96L03 361 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 PLIN2Q99541 437 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 REEP2Q9BRK0 252 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 ZDHHC4Q9NPG8 344 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 APOBEC2Q9Y235 224 aaKnown RBP19.33■□□□□ 0.68
UFD1-202ENST00000399523 CABIN1Q9Y6J0 2220 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 HUS1O60921 280 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 ADH1CP00326 375 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 GABRG2P18507 467 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 GTF2BQ00403 316 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 ADALQ6DHV7 355 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 SLFN12LQ6IEE8 588 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 CRELD2Q6UXH1 353 aaPredicted RBP19.32■□□□□ 0.68
UFD1-202ENST00000399523 TOGARAM2Q6ZUX3 1019 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 SLCO6A1Q86UG4 719 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 MYCT1Q8N699 235 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 CEP295NLQ96MC4 621 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 FIZ1Q96SL8 496 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 CALCOCO1Q9P1Z2 691 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 KIAA1522Q9P206 1035 aaPredicted RBP19.32■□□□□ 0.68
UFD1-202ENST00000399523 AGO2Q9UKV8 859 aaKnown RBP19.32■□□□□ 0.68
UFD1-202ENST00000399523 NAV2Q8IVL1 2488 aa19.32■□□□□ 0.68
UFD1-202ENST00000399523 IGHV1OR15-9A0A0B4J2B8 117 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.31■□□□□ 0.68
UFD1-202ENST00000399523 TISP43B9A030 160 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 GABRDO14764 452 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 TRAK2O60296 914 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 CBFA2T3O75081 653 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 OLFM2O95897 454 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 ABCD1P33897 745 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 TMEM119Q4V9L6 283 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 FAM171BQ6P995 826 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 OSTM1Q86WC4 334 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 RNF38Q9H0F5 515 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 FAM124BQ9H5Z6 455 aaPredicted RBP19.31■□□□□ 0.68
UFD1-202ENST00000399523 PARVGQ9HBI0 331 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 TRPM5Q9NZQ8 1165 aa19.31■□□□□ 0.68
UFD1-202ENST00000399523 SHROOM3Q8TF72 1996 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 ZNF840PA6NDX5 716 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 ZNF217O75362 1048 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 IL18RAPO95256 599 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 ADH5P11766 374 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 PCSK1P29120 753 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 POLR2BP30876 1174 aaKnown RBP19.3■□□□□ 0.68
UFD1-202ENST00000399523 LHX1P48742 406 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 USP46P62068 366 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 KDSRQ06136 332 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 PLEKHG6Q3KR16 790 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 TRMT11Q7Z4G4 463 aaKnown RBP19.3■□□□□ 0.68
UFD1-202ENST00000399523 TRIML1Q8N9V2 468 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 ZNF419Q96HQ0 510 aaPredicted RBP19.3■□□□□ 0.68
UFD1-202ENST00000399523 HSPA12BQ96MM6 686 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 LLPHQ9BRT6 129 aaKnown RBP19.3■□□□□ 0.68
UFD1-202ENST00000399523 TTLL2Q9BWV7 592 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.3■□□□□ 0.68
UFD1-202ENST00000399523 GDAP2Q9NXN4 497 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 AGAP1Q9UPQ3 857 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 CPQQ9Y646 472 aa19.3■□□□□ 0.68
UFD1-202ENST00000399523 FAM13AO94988 1023 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 PPP3CCP48454 512 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 NEK4P51957 841 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 VSTM1Q6UX27 236 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 DENND5BQ6ZUT9 1274 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 TMPRSS7Q7RTY8 843 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 ETFBKMTQ8IXQ9 262 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 LRRC52Q8N7C0 313 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 ZNF513Q8N8E2 541 aaPredicted RBP19.29■□□□□ 0.68
UFD1-202ENST00000399523 C1orf127Q8N9H9 656 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 CXorf38Q8TB03 319 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 CDK5RAP3Q96JB5 506 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 ZDHHC5Q9C0B5 715 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 CD248Q9HCU0 757 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 SUSD2Q9UGT4 822 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 PCOLCE2Q9UKZ9 415 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 HCN2Q9UL51 889 aa19.29■□□□□ 0.68
UFD1-202ENST00000399523 CFAP46Q8IYW2 2715 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 A0A1W2PQF6 199 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 TBC1D3BA6NDS4 549 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 SCAMP3O14828 347 aaKnown RBP19.28■□□□□ 0.68
UFD1-202ENST00000399523 HCRTO43612 131 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 LY6G5CQ5SRR4 150 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 C4orf50Q6ZRC1 276 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 GPBP1Q86WP2 473 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 TOP6BLQ8N6T0 577 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 SMPD4Q9NXE4 827 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 CFAP97Q9P2B7 532 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 TBC1D14Q9P2M4 693 aa19.28■□□□□ 0.68
UFD1-202ENST00000399523 MAGEC2Q9UBF1 373 aaPredicted RBP19.28■□□□□ 0.68
UFD1-202ENST00000399523 A0A087WV48 116 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 DKK1O94907 266 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 OAS1P00973 400 aaKnown RBP19.27■□□□□ 0.68
UFD1-202ENST00000399523 ITGB3P05106 788 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 HOXB2P14652 356 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 GNSP15586 552 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 ADSSP30520 456 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 WNT7BP56706 349 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 GAD2Q05329 585 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 C19orf57Q0VDD7 668 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 GRIK2Q13002 908 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms