RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SLC13A1Q9BZW2 595 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 MYH9P35579 1960 aaKnown RBP14.59□□□□□ -0.07
APOB-202ENST00000399256 ZNF541Q9H0D2 1346 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 TCP10L2B9ZVM9 353 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 CYB561D2O14569 222 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 IRF6O14896 467 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 EXTL3O43909 919 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 OPHN1O60890 802 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 CD48P09326 243 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 YY1P25490 414 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 PSMD6Q15008 389 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 CHI3L2Q15782 390 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 TBC1D25Q3MII6 688 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 ZBTB41Q5SVQ8 909 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 ARHGAP18Q8N392 663 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 PYDC1Q8WXC3 89 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 ANKEF1Q9NU02 776 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 TBC1D22BQ9NU19 505 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 POLIQ9UNA4 740 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 SPATA31D3P0C874 917 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 LRRC23Q53EV4 343 aaPredicted RBP14.58□□□□□ -0.08
APOB-202ENST00000399256 DACT2Q5SW24 774 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 SPATA31D4Q6ZUB0 917 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 SAMD3Q8N6K7 520 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 PPM1NQ8N819 430 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 PPP2R3CQ969Q6 453 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 SMYD3Q9H7B4 428 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 WDR64B1ANS9 1081 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 CALB1P05937 261 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 CC2D2BQ6DHV5 1058 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 RASSF3Q86WH2 238 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 E2F7Q96AV8 911 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 SGIP1Q9BQI5 828 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 WWP1Q9H0M0 922 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 VCX3BQ9H321 246 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 VCX3AQ9NNX9 186 aa14.58□□□□□ -0.08
APOB-202ENST00000399256 TCRBV5S1A1TA0A578 114 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 ARHGAP42A6NI28 874 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 BUD23O43709 281 aaKnown RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 WEE2P0C1S8 567 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 IL1R2P27930 398 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 BMPR2Q13873 1038 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 PIGHQ14442 188 aaPredicted RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 DNAL1Q4LDG9 190 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 SEZ6Q53EL9 994 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 LPCAT4Q643R3 524 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 FAM43BQ6ZT52 329 aaPredicted RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 MARK2Q7KZI7 788 aaKnown RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 PODNQ7Z5L7 613 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 ST13P4Q8IZP2 240 aaPredicted RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 OR5B17Q8NGF7 314 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 ZBTB45Q96K62 511 aaPredicted RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 PRMT6Q96LA8 375 aaPredicted RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 TAAR1Q96RJ0 339 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 EBF4Q9BQW3 602 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 NTPCRQ9BSD7 190 aaKnown RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 TESPA1A2RU30 521 aaPredicted RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 IL1BP01584 269 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 PSMA2P25787 234 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 PDE1BQ01064 536 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 SP4Q02446 784 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 NIPA1Q7RTP0 329 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 RFX6Q8HWS3 928 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 CCDC106Q9BWC9 280 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 RBAKQ9NYW8 714 aaPredicted RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 AGO2Q9UKV8 859 aaKnown RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 BRCA1P38398 1863 aaKnown RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 KLF11O14901 512 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 ZNF646O15015 1829 aaPredicted RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 HARSP12081 509 aaKnown RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 EIF3EP60228 445 aaKnown RBP14.57□□□□□ -0.08
APOB-202ENST00000399256 SLC25A3Q00325 362 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 DPYSL3Q14195 570 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 SFT2D3Q587I9 215 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 ZCCHC23Q6ZST2 131 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 FAM160B2Q86V87 743 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 OR6Y1Q8NGX8 325 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 FAM81AQ8TBF8 368 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 CLEC4DQ8WXI8 215 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 C20orf27Q9GZN8 174 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 GABBR1Q9UBS5 961 aa14.57□□□□□ -0.08
APOB-202ENST00000399256 KAT6AQ92794 2004 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 A6NJR5 290 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 CXorf49A8MYA2 514 aaPredicted RBP14.56□□□□□ -0.08
APOB-202ENST00000399256 STIP1P31948 543 aaKnown RBP14.56□□□□□ -0.08
APOB-202ENST00000399256 GRIA2P42262 883 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 JAK3P52333 1124 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 TGFB2P61812 414 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 CLDN10P78369 228 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 NCSTNQ92542 709 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 OPTNQ96CV9 577 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 C7orf26Q96N11 449 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 HAPLN2Q9GZV7 340 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 SLC9A2Q9UBY0 812 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 PCSK1NQ9UHG2 260 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 SCN9AQ15858 1988 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 ZNF862O60290 1169 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 ENTPD3O75355 529 aa14.56□□□□□ -0.08
APOB-202ENST00000399256 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
APOB-202ENST00000399256 SORBS2O94875 1100 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms