RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 CLCN5P51795 746 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 NUBP1P53384 320 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 SLC5A3P53794 718 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 MAP3K7CLP57077 242 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 USP46P62068 366 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 MYL5Q02045 173 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 TAF10Q12962 218 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 SKOR2Q2VWA4 1001 aaPredicted RBP15.1■□□□□ 0.01
HDDC2-202ENST00000398153 CDKAL1Q5VV42 579 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 PHLDB3Q6NSJ2 640 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 CAVIN1Q6NZI2 390 aaKnown RBP15.1■□□□□ 0.01
HDDC2-202ENST00000398153 C1orf228Q6PIY5 440 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 TMEM270Q6UE05 265 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 HFE2Q6ZVN8 426 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 SUGP1Q8IWZ8 645 aaKnown RBP15.1■□□□□ 0.01
HDDC2-202ENST00000398153 YAF2Q8IY57 180 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 ANKRD20A12PQ8NF67 263 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 BPIFB1Q8TDL5 484 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 FBXO32Q969P5 355 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 BPIFA3Q9BQP9 254 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 MFSD1Q9H3U5 465 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 SMOC2Q9H3U7 446 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 BRD9Q9H8M2 597 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 SAMSN1Q9NSI8 373 aaKnown RBP15.1■□□□□ 0.01
HDDC2-202ENST00000398153 HESX1Q9UBX0 185 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 APEX2Q9UBZ4 518 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 PCDHB4Q9Y5E5 795 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 PATJQ8NI35 1801 aa15.1■□□□□ 0.01
HDDC2-202ENST00000398153 ANAPC1Q9H1A4 1944 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 FAM86C2PA6NEL3 165 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 ZNF263O14978 683 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 BEST1O76090 585 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 HDCP19113 662 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 PON1P27169 355 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 PSEN1P49768 467 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 BCAT1P54687 386 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 STARD6P59095 220 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 TYRO3Q06418 890 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 MEA1Q16626 185 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 MIIPQ5JXC2 388 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 RRAGAQ7L523 313 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 MSANTD3Q96H12 275 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 KCNH6Q9H252 994 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 UBE2TQ9NPD8 197 aaPredicted RBP15.09■□□□□ 0.01
HDDC2-202ENST00000398153 ARHGEF3Q9NR81 526 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 SCML2Q9UQR0 700 aa15.09■□□□□ 0.01
HDDC2-202ENST00000398153 LRRC10BA6NIK2 292 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 HHLA1C9JL84 531 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 OLFM2O95897 454 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 OAS1P00973 400 aaKnown RBP15.08■□□□□ 0
HDDC2-202ENST00000398153 CKMP06732 381 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 SLC9A1P19634 815 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 RFX1P22670 979 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 GDI1P31150 447 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 KIF11P52732 1056 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 ZNF132P52740 706 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 SLC7A9P82251 487 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 CNGA2Q16280 664 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 SLC44A4Q53GD3 710 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 LCLAT1Q6UWP7 414 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 ARHGEF19Q8IW93 802 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 SIX5Q8N196 739 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 ZNF276Q8N554 614 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 SCAMP5Q8TAC9 235 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 USP13Q92995 863 aaPredicted RBP15.08■□□□□ 0
HDDC2-202ENST00000398153 NELL2Q99435 816 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 PRRX2Q99811 253 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 CRACR2AQ9BSW2 395 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 TLR8Q9NR97 1041 aaKnown RBP15.08■□□□□ 0
HDDC2-202ENST00000398153 TSPAN16Q9UKR8 245 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 ARHGAP26Q9UNA1 814 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 DAAM1Q9Y4D1 1078 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 ARIH1Q9Y4X5 557 aaPredicted RBP15.08■□□□□ 0
HDDC2-202ENST00000398153 USP3Q9Y6I4 520 aa15.08■□□□□ 0
HDDC2-202ENST00000398153 O00370 1275 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 XPO1O14980 1071 aaKnown RBP15.07■□□□□ 0
HDDC2-202ENST00000398153 PRAMEF12O95522 483 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 CAVIN2O95810 425 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 SETSIPP0DME0 302 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 CD19P15391 556 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 BST2Q10589 180 aaKnown RBP15.07■□□□□ 0
HDDC2-202ENST00000398153 MLF2Q15773 248 aaPredicted RBP15.07■□□□□ 0
HDDC2-202ENST00000398153 RAB41Q5JT25 222 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 HECTD3Q5T447 861 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 ASTLQ6HA08 431 aaPredicted RBP15.07■□□□□ 0
HDDC2-202ENST00000398153 C11orf57Q6ZUT1 292 aaPredicted RBP15.07■□□□□ 0
HDDC2-202ENST00000398153 CCDC186Q7Z3E2 898 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 DDX42Q86XP3 938 aaKnown RBP eCLIP15.07■□□□□ 0
HDDC2-202ENST00000398153 RBBP8NLQ8NC74 664 aaPredicted RBP15.07■□□□□ 0
HDDC2-202ENST00000398153 ST13P5Q8NFI4 369 aaPredicted RBP15.07■□□□□ 0
HDDC2-202ENST00000398153 RSPRY1Q96DX4 576 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 KREMEN1Q96MU8 473 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 DDX23Q9BUQ8 820 aaKnown RBP15.07■□□□□ 0
HDDC2-202ENST00000398153 OSBPL6Q9BZF3 934 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 TRPC7Q9HCX4 862 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 FANCLQ9NW38 375 aa15.07■□□□□ 0
HDDC2-202ENST00000398153 KRBA1A5PL33 1030 aa15.06■□□□□ 0
HDDC2-202ENST00000398153 C2orf78A6NCI8 922 aa15.06■□□□□ 0
HDDC2-202ENST00000398153 SMTNL1A8MU46 457 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms