RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ACADSBP45954 432 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SLC5A3P53794 718 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 MTF1Q14872 753 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CCDC122Q5T0U0 273 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 ALKBH5Q6P6C2 394 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 DENND5BQ6ZUT9 1274 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 NUP93Q8N1F7 819 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 DEFB123Q8N688 67 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GPR152Q8TDT2 470 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GIPC2Q8TF65 315 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 MYLIPQ8WY64 445 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 ISCUQ9H1K1 167 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 KCNF1Q9H3M0 494 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 ST7Q9NRC1 585 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 ZDHHC7Q9NXF8 308 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 IL37Q9NZH6 218 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 EPN1Q9Y6I3 576 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 USP3Q9Y6I4 520 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SZT2Q5T011 3432 aa20.52■□□□□ 0.87
MAP1LC3A-203ENST00000397709 FAM170AA1A519 330 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 TMCO5BA8MYB1 307 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 EIF3CLB5ME19 914 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 E5RJQ4 531 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ZNF263O14978 683 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 LINC01565O15544 149 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ARHGAP6O43182 974 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 RFPL2O75678 378 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 NDUFA10O95299 355 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ERBB2P04626 1255 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 HNRNPA1P09651 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 GABRB2P47870 512 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 EPHB3P54753 998 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ADIGQ0VDE8 80 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 PTP4A2Q12974 167 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ADAM15Q13444 863 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 COL19A1Q14993 1142 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 MMS22LQ6ZRQ5 1243 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 MON1BQ7L1V2 547 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ERICH1Q86X53 443 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 MSANTD4Q8NCY6 345 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 STKLD1Q8NE28 680 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 IPO4Q8TEX9 1081 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 EIF3CQ99613 913 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 LRRC4Q9HBW1 653 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 COMMD8Q9NX08 183 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 TJP2Q9UDY2 1190 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ASB3Q9Y575 518 aa20.51■□□□□ 0.87
MAP1LC3A-203ENST00000397709 NRDCO43847 1150 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 RTN3O95197 1032 aaPredicted RBP20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 CSH1P0DML2 217 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 CSH2P0DML3 217 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 SRGAP2BP0DMP2 458 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 TKTL1P51854 596 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 USP46P62068 366 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 C1QBPQ07021 282 aaKnown RBP20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 MTMR3Q13615 1198 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 VEPH1Q14D04 833 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 CTC1Q2NKJ3 1217 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ITIH5Q86UX2 942 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 MCOLN2Q8IZK6 566 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 CMASQ8NFW8 434 aaPredicted RBP20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 SCAMP5Q8TAC9 235 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 PSMG2Q969U7 264 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 C11orf70Q9BRQ4 267 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 TTLL2Q9BWV7 592 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 SFXN1Q9H9B4 322 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 MTMR10Q9NXD2 777 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ADAM22Q9P0K1 906 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 NCANO14594 1321 aa20.5■□□□□ 0.87
MAP1LC3A-203ENST00000397709 FAM92AA1XBS5 289 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 PIK3R2O00459 728 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 CCL16O15467 120 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 PAPSS1O43252 624 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 NCK2O43639 380 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 FTLP02792 175 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 CALB1P05937 261 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 LCP1P13796 627 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 HMGA1P17096 107 aaKnown RBP20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 GSCP56915 257 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 SNX16P57768 344 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 DNAJB7Q7Z6W7 309 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 DNAAF5Q86Y56 855 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 SIX6OS1Q8N1H7 587 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 SCML4Q8N228 414 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ZNF707Q96C28 371 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 C18orf8Q96DM3 657 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 TRMT2BQ96GJ1 504 aaKnown RBP20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 VCPIP1Q96JH7 1222 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 MYRFLQ96LU7 910 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 PRKD2Q9BZL6 878 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 MIS12Q9H081 205 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 SYNCQ9H7C4 482 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 CNGB3Q9NQW8 809 aa20.49■□□□□ 0.87
MAP1LC3A-203ENST00000397709 ZNF638Q14966 1978 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3A-203ENST00000397709 MYO16Q9Y6X6 1858 aa20.48■□□□□ 0.87
MAP1LC3A-203ENST00000397709 FBXO21O94952 628 aa20.48■□□□□ 0.87
MAP1LC3A-203ENST00000397709 C2CD6Q53TS8 623 aa20.48■□□□□ 0.87
MAP1LC3A-203ENST00000397709 C10orf76Q5T2E6 689 aa20.48■□□□□ 0.87
MAP1LC3A-203ENST00000397709 CYP4A22Q5TCH4 519 aa20.48■□□□□ 0.87
MAP1LC3A-203ENST00000397709 PM20D1Q6GTS8 502 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms