RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MTMR11A4FU01 709 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 F8VP50 259 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 C2CD2LO14523 706 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 PROSCO94903 275 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 SCNN1AP37088 669 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 NDUFV1P49821 464 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 TKTL1P51854 596 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 FAM109BQ6ICB4 259 aaPredicted RBP28.91■■■□□ 2.22
CPNE1-203ENST00000397442 TRNP1Q6NT89 227 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 RNF19BQ6ZMZ0 732 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 EMC1Q8N766 993 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 KLHL23Q8NBE8 558 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 CLSTN3Q9BQT9 956 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 LRRC4Q9HBW1 653 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 PNPLA8Q9NP80 782 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 PLXNA4Q9HCM2 1894 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 CEP290O15078 2479 aa28.91■■■□□ 2.22
CPNE1-203ENST00000397442 TNS4Q8IZW8 715 aa28.9■■■□□ 2.22
CPNE1-203ENST00000397442 TTC9BQ8N6N2 239 aa28.9■■■□□ 2.22
CPNE1-203ENST00000397442 FNIP1Q8TF40 1166 aa28.9■■■□□ 2.22
CPNE1-203ENST00000397442 CD101Q93033 1021 aa28.9■■■□□ 2.22
CPNE1-203ENST00000397442 RNPC3Q96LT9 517 aaKnown RBP28.9■■■□□ 2.22
CPNE1-203ENST00000397442 L2HGDHQ9H9P8 463 aa28.9■■■□□ 2.22
CPNE1-203ENST00000397442 IP6K2Q9UHH9 426 aa28.9■■■□□ 2.22
CPNE1-203ENST00000397442 WDR27A2RRH5 827 aa28.89■■■□□ 2.22
CPNE1-203ENST00000397442 GRXCR1A8MXD5 290 aa28.89■■■□□ 2.22
CPNE1-203ENST00000397442 MAGEA11P43364 429 aa28.89■■■□□ 2.22
CPNE1-203ENST00000397442 ROR1Q01973 937 aa28.89■■■□□ 2.22
CPNE1-203ENST00000397442 SMARCB1Q12824 385 aa28.89■■■□□ 2.22
CPNE1-203ENST00000397442 VSTM1Q6UX27 236 aa28.89■■■□□ 2.22
CPNE1-203ENST00000397442 SLC26A9Q7LBE3 791 aa28.89■■■□□ 2.22
CPNE1-203ENST00000397442 CRISPLD1Q9H336 500 aa28.89■■■□□ 2.22
CPNE1-203ENST00000397442 SAR1BQ9Y6B6 198 aa28.89■■■□□ 2.22
CPNE1-203ENST00000397442 LINC01553A4QN01 128 aa28.89■■■□□ 2.21
CPNE1-203ENST00000397442 GRAP2O75791 330 aa28.89■■■□□ 2.21
CPNE1-203ENST00000397442 ARHGEF15O94989 841 aa28.89■■■□□ 2.21
CPNE1-203ENST00000397442 PRLRP16471 622 aa28.89■■■□□ 2.21
CPNE1-203ENST00000397442 OR1D2P34982 312 aa28.89■■■□□ 2.21
CPNE1-203ENST00000397442 BMPR1AP36894 532 aa28.89■■■□□ 2.21
CPNE1-203ENST00000397442 GRIK1P39086 918 aa28.89■■■□□ 2.21
CPNE1-203ENST00000397442 KRT17Q04695 432 aa28.89■■■□□ 2.21
CPNE1-203ENST00000397442 RPS6KA1Q15418 735 aa28.89■■■□□ 2.21
CPNE1-203ENST00000397442 NDRG1Q92597 394 aaKnown RBP28.89■■■□□ 2.21
CPNE1-203ENST00000397442 GBF1Q92538 1859 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 C2CD4BA6NLJ0 364 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 TNFRSF10BO14763 440 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 SRGAP2O75044 1071 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 URODP06132 367 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 MYOGP15173 224 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 MAN1A1P33908 653 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 FLT3P36888 993 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 RNASE9P60153 205 aaKnown RBP28.88■■■□□ 2.21
CPNE1-203ENST00000397442 MRPS5P82675 430 aaKnown RBP28.88■■■□□ 2.21
CPNE1-203ENST00000397442 DAB2IPQ5VWQ8 1189 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 SIX6OS1Q8N1H7 587 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 NIPA2Q8N8Q9 360 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 SPPL2BQ8TCT7 592 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 ULBP1Q9BZM6 244 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 ZBP1Q9H171 429 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 MRFAP1Q9Y605 127 aa28.88■■■□□ 2.21
CPNE1-203ENST00000397442 DDX3YO15523 660 aaKnown RBP28.87■■■□□ 2.21
CPNE1-203ENST00000397442 LILRB3O75022 631 aa28.87■■■□□ 2.21
CPNE1-203ENST00000397442 SLC1A1P43005 524 aa28.87■■■□□ 2.21
CPNE1-203ENST00000397442 GPR65Q8IYL9 337 aa28.87■■■□□ 2.21
CPNE1-203ENST00000397442 C2orf15Q8WU43 125 aaKnown RBP28.87■■■□□ 2.21
CPNE1-203ENST00000397442 AUTS2Q8WXX7 1259 aa28.87■■■□□ 2.21
CPNE1-203ENST00000397442 OSBPL9Q96SU4 736 aa28.87■■■□□ 2.21
CPNE1-203ENST00000397442 PSMB7Q99436 277 aa28.87■■■□□ 2.21
CPNE1-203ENST00000397442 CNGB3Q9NQW8 809 aa28.87■■■□□ 2.21
CPNE1-203ENST00000397442 STK39Q9UEW8 545 aa28.87■■■□□ 2.21
CPNE1-203ENST00000397442 LCMT1Q9UIC8 334 aa28.87■■■□□ 2.21
CPNE1-203ENST00000397442 PIGHQ14442 188 aaPredicted RBP28.86■■■□□ 2.21
CPNE1-203ENST00000397442 ARCQ7LC44 396 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 SPRED2Q7Z698 418 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 SCN4BQ8IWT1 228 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 C8orf48Q96LL4 319 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 CDC23Q9UJX2 597 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 USP3Q9Y6I4 520 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 SPOPO43791 374 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 FBXO21O94952 628 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 DNAJB2P25686 324 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 CXCR5P32302 372 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 CTNNB1P35222 781 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 GPR15P49685 360 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 DNA2P51530 1060 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 DAOAP59103 153 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 BHLHA9Q7RTU4 235 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 COG1Q8WTW3 980 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 RXFP2Q8WXD0 754 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 KRT35Q92764 455 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 SLC27A5Q9Y2P5 690 aa28.86■■■□□ 2.21
CPNE1-203ENST00000397442 CTSAP10619 480 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 PSMA2P25787 234 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 MARCKSL1P49006 195 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 ZNF143P52747 638 aaPredicted RBP28.85■■■□□ 2.21
CPNE1-203ENST00000397442 DDR2Q16832 855 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 EFHC1Q5JVL4 640 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 PM20D1Q6GTS8 502 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 SCML4Q8N228 414 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 ARFGAP1Q8N6T3 406 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms