RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ATP6V1G3Q96LB4 118 aa15.89■□□□□ 0.14
MCF2L-205ENST00000397017 DDX23Q9BUQ8 820 aaKnown RBP15.89■□□□□ 0.14
MCF2L-205ENST00000397017 SMYD2Q9NRG4 433 aa15.89■□□□□ 0.14
MCF2L-205ENST00000397017 GBP1P32455 592 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 PBX3P40426 434 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 ARL4CP56559 192 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 TPI1P60174 286 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 TXNRD3NBQ6F5E7 133 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 TMEM40Q8WWA1 233 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 EXOC4Q96A65 974 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 CNPY3Q9BT09 278 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 NSRP1Q9H0G5 558 aaKnown RBP15.89■□□□□ 0.13
MCF2L-205ENST00000397017 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.89■□□□□ 0.13
MCF2L-205ENST00000397017 GOLGA8CPA6NN73 597 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 ATP9BO43861 1147 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 EPHB2P29323 1055 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 STILQ15468 1287 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 HIF1AQ16665 826 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 CTU1Q7Z7A3 348 aaKnown RBP15.89■□□□□ 0.13
MCF2L-205ENST00000397017 C4orf33Q8N1A6 199 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 SPON2Q9BUD6 331 aa15.89■□□□□ 0.13
MCF2L-205ENST00000397017 DDX3YO15523 660 aaKnown RBP15.88■□□□□ 0.13
MCF2L-205ENST00000397017 ELF1P32519 619 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 PDE1BQ01064 536 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 C9orf57Q5W0N0 161 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 OVOS1Q6IE37 1185 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 PMF1Q6P1K2 205 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 ANKS4BQ8N8V4 417 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 SLC4A11Q8NBS3 891 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 STKLD1Q8NE28 680 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 TRIB2Q92519 343 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 APOL2Q9BQE5 337 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 TRAIPQ9BWF2 469 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 ZNF518BQ9C0D4 1074 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 SIX4Q9UIU6 781 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 NCANO14594 1321 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 PSTPIP1O43586 416 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 SARNPP82979 210 aaKnown RBP15.88■□□□□ 0.13
MCF2L-205ENST00000397017 CNGA2Q16280 664 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 GDF6Q6KF10 455 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-205ENST00000397017 TSNARE1Q96NA8 513 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 ZMAT2Q96NC0 199 aaKnown RBP15.88■□□□□ 0.13
MCF2L-205ENST00000397017 KLC2Q9H0B6 622 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 C2CD2Q9Y426 696 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 IGKV6D-21A0A0A0MT36 114 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 AMPD1P23109 780 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 CLCNKBP51801 687 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 ATXN1P54253 815 aaKnown RBP15.88■□□□□ 0.13
MCF2L-205ENST00000397017 BST2Q10589 180 aaKnown RBP15.88■□□□□ 0.13
MCF2L-205ENST00000397017 NSMCE1Q8WV22 266 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 FGD4Q96M96 766 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 SMC6Q96SB8 1091 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 ULBP1Q9BZM6 244 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 AVENQ9NQS1 362 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-205ENST00000397017 XPO7Q9UIA9 1087 aaKnown RBP15.88■□□□□ 0.13
MCF2L-205ENST00000397017 GGT7Q9UJ14 662 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 PCDHB7Q9Y5E2 793 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 ZNF831Q5JPB2 1677 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 CD48P09326 243 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 BRAFP15056 766 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-205ENST00000397017 NRLP54845 237 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 GHRHRQ02643 423 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 EXD1Q8NHP7 514 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 DCLK3Q9C098 648 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 SDCBP2Q9H190 292 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 PLEKHA5Q9HAU0 1116 aa15.88■□□□□ 0.13
MCF2L-205ENST00000397017 ASPAP45381 313 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 CCDC110Q8TBZ0 833 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 CLEC4CQ8WTT0 213 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 CELF6Q96J87 481 aaKnown RBP15.87■□□□□ 0.13
MCF2L-205ENST00000397017 UBP1Q9NZI7 540 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 AP4E1Q9UPM8 1137 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 CILPO75339 1184 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 BANF1O75531 89 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 HMGCRP04035 888 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 PAEPP09466 180 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 PTPN1P18031 435 aaKnown RBP15.87■□□□□ 0.13
MCF2L-205ENST00000397017 HNRNPH2P55795 449 aaKnown RBP15.87■□□□□ 0.13
MCF2L-205ENST00000397017 FAM171A1Q5VUB5 890 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 NEUROG2Q9H2A3 272 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 GOLGA4Q13439 2230 aaKnown RBP15.87■□□□□ 0.13
MCF2L-205ENST00000397017 HMGB1P1B2RPK0 211 aaPredicted RBP15.87■□□□□ 0.13
MCF2L-205ENST00000397017 KCNK1O00180 336 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 SEPT4O43236 478 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 CAND2O75155 1236 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 ODC1P11926 461 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 DCAF12L1Q5VU92 463 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 MON1BQ7L1V2 547 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 VPS52Q8N1B4 723 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 B3GALNT2Q8NCR0 500 aa15.87■□□□□ 0.13
MCF2L-205ENST00000397017 UNGP13051 313 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-205ENST00000397017 LIG3P49916 1009 aa15.86■□□□□ 0.13
MCF2L-205ENST00000397017 NUGGCQ68CJ6 796 aa15.86■□□□□ 0.13
MCF2L-205ENST00000397017 ARRDC4Q8NCT1 418 aa15.86■□□□□ 0.13
MCF2L-205ENST00000397017 SLC13A1Q9BZW2 595 aa15.86■□□□□ 0.13
MCF2L-205ENST00000397017 EEF2KO00418 725 aaKnown RBP15.86■□□□□ 0.13
MCF2L-205ENST00000397017 ADCY6O43306 1168 aa15.86■□□□□ 0.13
MCF2L-205ENST00000397017 MAGEA4P43358 317 aa15.86■□□□□ 0.13
MCF2L-205ENST00000397017 C6orf118Q5T5N4 469 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms