RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 UBN1Q9NPG3 1134 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ZDHHC18Q9NUE0 388 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PCMTD2Q9NV79 361 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS41-203ENST00000395969 DDX56Q9NY93 547 aaKnown RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 ZNF232Q9UNY5 417 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 NUB1Q9Y5A7 615 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 SRCAPQ6ZRS2 3230 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 CCDC169A6NNP5 214 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 TISP43B9A030 160 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 GPR25O00155 361 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PHF2O75151 1096 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PAPLNO95428 1278 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 C1RP00736 705 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 SMIM10L2AP0DMW4 78 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 SMIM10L2BP0DMW5 78 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 SKIP12755 728 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 P4HA1P13674 534 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 CALB2P22676 271 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 SP100P23497 879 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 PSEN2P49810 448 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 SLC18A1P54219 525 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 RAD23BP54727 409 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 POLE2P56282 527 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 LACTBP83111 547 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 MAMLD1Q13495 774 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 EIF4EBP2Q13542 120 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 C1QTNF12Q5T7M4 302 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ZNF449Q6P9G9 518 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 TMEM110Q86TL2 294 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 LMNTD2Q8IXW0 634 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 WDTC1Q8N5D0 677 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 SLC4A11Q8NBS3 891 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 CFAP61Q8NHU2 1237 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 NKD2Q969F2 451 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 UTP4Q969X6 686 aaKnown RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 TMEM143Q96AN5 459 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 UROC1Q96N76 676 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PPP1R10Q96QC0 940 aaKnown RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 TARS2Q9BW92 718 aaKnown RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 IKZF4Q9H2S9 585 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 RNPEPL1Q9HAU8 725 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 NLRC4Q9NPP4 1024 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PDGFCQ9NRA1 345 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 FAM114A2Q9NRY5 505 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PARVAQ9NVD7 372 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 COMMD8Q9NX08 183 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 FLRT1Q9NZU1 646 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 WHRNQ9P202 907 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 RCOR3Q9P2K3 495 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 NKX1-2Q9UD57 310 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 PRKAG3Q9UGI9 489 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 IP6K2Q9UHH9 426 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 KLF15Q9UIH9 416 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 USP15Q9Y4E8 981 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 RAD54BQ9Y620 910 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 NOP56O00567 594 aaKnown RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 FTLP02792 175 aaPredicted RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 PDHA1P08559 390 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 ARF4P18085 180 aaPredicted RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 RPL9P32969 192 aaKnown RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 PSMC4P43686 418 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 RBP5P82980 135 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 TNK2Q07912 1038 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 CCDC15Q0P6D6 951 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 MTA1Q13330 715 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 DYNC1I2Q13409 638 aaKnown RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 FRG1Q14331 258 aaKnown RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 MFSD10Q14728 455 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 PARP6Q2NL67 630 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 PABPC1LQ4VXU2 614 aaKnown RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 NOTUMQ6P988 496 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 TRAF7Q6Q0C0 670 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 C4orf22Q6V702 233 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 MOB2Q70IA6 237 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 SLC47A2Q86VL8 602 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 UBL4BQ8N7F7 174 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 C1orf127Q8N9H9 656 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 SMC1BQ8NDV3 1235 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 SH3TC2Q8TF17 1288 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 ARHGEF26Q96DR7 871 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 ANKRD36BP1Q96IX9 119 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 PLEKHG4BQ96PX9 1271 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 PKMYT1Q99640 499 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 PRMT1Q99873 361 aaKnown RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 MTG1Q9BT17 334 aaPredicted RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 GCOM2Q9BZD3 368 aaPredicted RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 THAP2Q9H0W7 228 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 ELAC1Q9H777 363 aaKnown RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 RXFP1Q9HBX9 757 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 PARP2Q9UGN5 583 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 LIMD1Q9UGP4 676 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 ZMIZ1Q9ULJ6 1067 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 ZMYND8Q9ULU4 1186 aaPredicted RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 PACSIN2Q9UNF0 486 aaPredicted RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 FZD1Q9UP38 647 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 TP73O15350 636 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 SEPT4O43236 478 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 DAPK3O43293 454 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 PEX11AO75192 247 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms