RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 LAIR1Q6GTX8 287 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 SPOPLQ6IQ16 392 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 WDR5BQ86VZ2 330 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 TMC2Q8TDI7 906 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 ATP2A3Q93084 1043 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 KCNK16Q96T55 309 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 GMEB2Q9UKD1 530 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 ANTXRLA6NF34 631 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 SCAMP3O14828 347 aaKnown RBP19.17■□□□□ 0.66
CXCL12-204ENST00000395793 RHOBTB3O94955 611 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 MYL1P05976 194 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 PFKLP17858 780 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 SLC7A9P82251 487 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 FOXK2Q01167 660 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 SPEM2Q0P670 501 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 CEP135Q66GS9 1140 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 SV2AQ7L0J3 742 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 CD101Q93033 1021 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 SECISBP2LQ93073 1101 aaKnown RBP19.17■□□□□ 0.66
CXCL12-204ENST00000395793 SMPD4Q9NXE4 827 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 RAB23Q9ULC3 237 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 USP18Q9UMW8 372 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 TRAF3IP3Q9Y228 551 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 GTF3C3Q9Y5Q9 886 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 CPQQ9Y646 472 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 SDK1Q7Z5N4 2213 aa19.17■□□□□ 0.66
CXCL12-204ENST00000395793 MED19A0JLT2 244 aaPredicted RBP19.16■□□□□ 0.66
CXCL12-204ENST00000395793 TNFRSF10BO14763 440 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 CLSTN1O94985 981 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 CCDC130P13994 396 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 DRD1P21728 446 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 OPRD1P41143 372 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 ASPAP45381 313 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 PUM1Q14671 1186 aaKnown RBP eCLIP19.16■□□□□ 0.66
CXCL12-204ENST00000395793 KRBA2Q6ZNG9 492 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 ACOT1Q86TX2 421 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 FUKQ8N0W3 1084 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 NUP93Q8N1F7 819 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 ZMIZ2Q8NF64 920 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 SCAMP5Q8TAC9 235 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 GDPD2Q9HCC8 539 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.16■□□□□ 0.66
CXCL12-204ENST00000395793 MAPK8IP1Q9UQF2 711 aa19.16■□□□□ 0.66
CXCL12-204ENST00000395793 AKAP3O75969 853 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 ABL1P00519 1130 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 ASS1P00966 412 aaKnown RBP19.15■□□□□ 0.66
CXCL12-204ENST00000395793 HLA-DRAP01903 254 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 CYP17A1P05093 508 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 RETP07949 1114 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 CNR2P34972 360 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 PDE6CP51160 858 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 AMPD2Q01433 879 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 DGLUCYQ7Z3D6 616 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 FILIP1Q7Z7B0 1213 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 FAM160A2Q8N612 972 aaPredicted RBP19.15■□□□□ 0.66
CXCL12-204ENST00000395793 GPR161Q8N6U8 529 aaKnown RBP19.15■□□□□ 0.66
CXCL12-204ENST00000395793 RPLP0P6Q8NHW5 317 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 ZFRQ96KR1 1074 aaKnown RBP19.15■□□□□ 0.66
CXCL12-204ENST00000395793 SLITRK1Q96PX8 696 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 KRT82Q9NSB4 513 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 IL37Q9NZH6 218 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 EHD2Q9NZN4 543 aa19.15■□□□□ 0.66
CXCL12-204ENST00000395793 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.15■□□□□ 0.66
CXCL12-204ENST00000395793 A0A1W2PQ27 194 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 A0A1W2PQ64 194 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 A0A1W2PQD8 194 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 CALUO43852 315 aaPredicted RBP19.14■□□□□ 0.65
CXCL12-204ENST00000395793 BEST1O76090 585 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 TRIM49P0CI25 452 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 TRIM49CP0CI26 452 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 YWHAQP27348 245 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 PIK3CAP42336 1068 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 PPP3CCP48454 512 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 PGFP49763 221 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 NDST1P52848 882 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 SLC5A3P53794 718 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 PPP3CAQ08209 521 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 MESP2Q0VG99 397 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 SGSM1Q2NKQ1 1148 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 ZCWPW2Q504Y3 356 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 FBXO32Q969P5 355 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 SMARCD1Q96GM5 515 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 TNIP3Q96KP6 325 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 HHIPQ96QV1 700 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 TWNKQ96RR1 684 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 SMOQ99835 787 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 MED10Q9BTT4 135 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 APOBEC3GQ9HC16 384 aaKnown RBP19.14■□□□□ 0.65
CXCL12-204ENST00000395793 DMAP1Q9NPF5 467 aaPredicted RBP19.14■□□□□ 0.65
CXCL12-204ENST00000395793 SLC8A2Q9UPR5 921 aa19.14■□□□□ 0.65
CXCL12-204ENST00000395793 MAPK13O15264 365 aa19.13■□□□□ 0.65
CXCL12-204ENST00000395793 AP1G2O75843 785 aa19.13■□□□□ 0.65
CXCL12-204ENST00000395793 RTN3O95197 1032 aaPredicted RBP19.13■□□□□ 0.65
CXCL12-204ENST00000395793 NFATC1O95644 943 aa19.13■□□□□ 0.65
CXCL12-204ENST00000395793 NR2F2P24468 414 aa19.13■□□□□ 0.65
CXCL12-204ENST00000395793 VAMP7P51809 220 aa19.13■□□□□ 0.65
CXCL12-204ENST00000395793 LMNB2Q03252 620 aa19.13■□□□□ 0.65
CXCL12-204ENST00000395793 NFIL3Q16649 462 aa19.13■□□□□ 0.65
CXCL12-204ENST00000395793 FBXO43Q4G163 708 aa19.13■□□□□ 0.65
CXCL12-204ENST00000395793 CEP68Q76N32 757 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms