RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 SNX16P57768 344 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 ERVK-21P61565 698 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 PSMC1P62191 440 aaKnown RBP20.29■□□□□ 0.84
LMNB1-202ENST00000395354 SLC7A5Q01650 507 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 PKDCCQ504Y2 493 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 PPP2R2DQ66LE6 453 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 XYLT1Q86Y38 959 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 SLC13A5Q86YT5 568 aaPredicted RBP20.29■□□□□ 0.84
LMNB1-202ENST00000395354 KATNAL2Q8IYT4 538 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 STK32AQ8WU08 396 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 KBTBD7Q8WVZ9 684 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.29■□□□□ 0.84
LMNB1-202ENST00000395354 MCRS1Q96EZ8 462 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 RUNDC3BQ96NL0 473 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 SAMD11Q96NU1 681 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 MCEEQ96PE7 176 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 CPXM1Q96SM3 734 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 SNX25Q9H3E2 840 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 SYNCQ9H7C4 482 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 LAMA2P24043 3122 aaKnown RBP20.29■□□□□ 0.84
LMNB1-202ENST00000395354 SF3B1O75533 1304 aaKnown RBP eCLIP20.28■□□□□ 0.844e-6■■■■■ 84.1
LMNB1-202ENST00000395354 A8MXQ7 604 aa20.28■□□□□ 0.84
LMNB1-202ENST00000395354 RB1P06400 928 aa20.28■□□□□ 0.84
LMNB1-202ENST00000395354 KRT3P12035 628 aa20.28■□□□□ 0.84
LMNB1-202ENST00000395354 GNL1P36915 607 aaPredicted RBP20.28■□□□□ 0.84
LMNB1-202ENST00000395354 RPL7AP62424 266 aaKnown RBP20.28■□□□□ 0.84
LMNB1-202ENST00000395354 ELAVL2Q12926 359 aaKnown RBP20.28■□□□□ 0.84
LMNB1-202ENST00000395354 CYP4A22Q5TCH4 519 aa20.28■□□□□ 0.84
LMNB1-202ENST00000395354 FAM171A1Q5VUB5 890 aa20.28■□□□□ 0.84
LMNB1-202ENST00000395354 ACOT1Q86TX2 421 aa20.28■□□□□ 0.84
LMNB1-202ENST00000395354 TIFAQ96CG3 184 aa20.28■□□□□ 0.84
LMNB1-202ENST00000395354 OGFRQ9NZT2 677 aa20.28■□□□□ 0.84
LMNB1-202ENST00000395354 BHMG1C9JSJ3 638 aaPredicted RBP20.27■□□□□ 0.84
LMNB1-202ENST00000395354 C5orf67F2Z3F1 127 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 MAP2K7O14733 419 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 FSCN2O14926 492 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 EFEMP2O95967 443 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 ERBB2P04626 1255 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 GLI1P08151 1106 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 CHRNA3P32297 505 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 PLCB3Q01970 1234 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 CYP1B1Q16678 543 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 GOLGA7BQ2TAP0 167 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 PPP1R26Q5T8A7 1209 aaPredicted RBP20.27■□□□□ 0.84
LMNB1-202ENST00000395354 TAS1R1Q7RTX1 841 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 DDX53Q86TM3 631 aaKnown RBP20.27■□□□□ 0.84
LMNB1-202ENST00000395354 TNIP3Q96KP6 325 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 VN1R3Q9BXE9 311 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 DDX47Q9H0S4 455 aaKnown RBP20.27■□□□□ 0.84
LMNB1-202ENST00000395354 CERS4Q9HA82 394 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 HESX1Q9UBX0 185 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 PCDHB8Q9UN66 801 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 TIMM13Q9Y5L4 95 aaPredicted RBP20.27■□□□□ 0.84
LMNB1-202ENST00000395354 NLRC5Q86WI3 1866 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 LAMA3Q16787 3333 aa20.27■□□□□ 0.84
LMNB1-202ENST00000395354 ARHGEF37A1IGU5 675 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 PHF2O75151 1096 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 ZMYND10O75800 440 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 DHX34Q14147 1143 aaKnown RBP20.26■□□□□ 0.83
LMNB1-202ENST00000395354 ACAP1Q15027 740 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 WSCD1Q658N2 575 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 CEP57Q86XR8 500 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 ADGRF2Q8IZF7 708 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 EXD1Q8NHP7 514 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 UBA3Q8TBC4 463 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 AENQ8WTP8 325 aaKnown RBP20.26■□□□□ 0.83
LMNB1-202ENST00000395354 EPB41L5Q9HCM4 733 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 ALG13Q9NP73 1137 aaKnown RBP20.26■□□□□ 0.83
LMNB1-202ENST00000395354 NME7Q9Y5B8 376 aa20.26■□□□□ 0.83
LMNB1-202ENST00000395354 FAM187AA6NFU0 413 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 SYN3O14994 580 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 GJB6O95452 261 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 ODC1P11926 461 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 CETN2P41208 172 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 GUCY2DQ02846 1103 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 ZNF252P-AS1Q0IIN9 211 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 AADACL2Q6P093 401 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 C12orf29Q8N999 325 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 C11orf84Q9BUA3 381 aaPredicted RBP20.25■□□□□ 0.83
LMNB1-202ENST00000395354 SLC4A5Q9BY07 1137 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 CYLDQ9NQC7 956 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 STK39Q9UEW8 545 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 SOD2P04179 222 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 TYMPP19971 482 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 FGFR3P22607 806 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 TKTP29401 623 aaKnown RBP20.25■□□□□ 0.83
LMNB1-202ENST00000395354 RFC1P35251 1148 aaPredicted RBP20.25■□□□□ 0.83
LMNB1-202ENST00000395354 TAS2R40P59535 323 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 OGDHQ02218 1023 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 CUL1Q13616 776 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 USP41Q3LFD5 358 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 EMBQ6PCB8 327 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 METTL23Q86XA0 190 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 ZDHHC17Q8IUH5 632 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 RNF168Q8IYW5 571 aaPredicted RBP20.25■□□□□ 0.83
LMNB1-202ENST00000395354 VPS52Q8N1B4 723 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 TMEM86AQ8N2M4 240 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 PRELID2Q8N945 189 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 C12orf50Q8NA57 414 aaPredicted RBP20.25■□□□□ 0.83
LMNB1-202ENST00000395354 ANKRD52Q8NB46 1076 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms