RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TOP3BO95985 862 aaKnown RBP22.53■■□□□ 1.2
TRAF4-203ENST00000394925 CEACAM1P13688 526 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 TIE1P35590 1138 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 SURF1Q15526 300 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 FAM173BQ6P4H8 233 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 HS2ST1Q7LGA3 356 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 OLIG1Q8TAK6 271 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 MYCBPAPQ8TBZ2 947 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 PNKPQ96T60 521 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 MRPL45Q9BRJ2 306 aaKnown RBP22.53■■□□□ 1.2
TRAF4-203ENST00000394925 ZMIZ1Q9ULJ6 1067 aa22.53■■□□□ 1.2
TRAF4-203ENST00000394925 PI4KAP42356 2102 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 ASPMQ8IZT6 3477 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 A0A087X0B3 334 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 SGK1O00141 431 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 SLC9A3R1O14745 358 aaPredicted RBP22.52■■□□□ 1.2
TRAF4-203ENST00000394925 MAP3K13O43283 966 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 APODP05090 189 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 CSRP1P21291 193 aaKnown RBP22.52■■□□□ 1.2
TRAF4-203ENST00000394925 GNL1P36915 607 aaPredicted RBP22.52■■□□□ 1.2
TRAF4-203ENST00000394925 PPP3CCP48454 512 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 NOP14P78316 857 aaKnown RBP22.52■■□□□ 1.2
TRAF4-203ENST00000394925 TAF10Q12962 218 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 EMC10Q5UCC4 262 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 ARMCX6Q7L4S7 300 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 LPCAT2Q7L5N7 544 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 CCDC65Q8IXS2 484 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 IL17RCQ8NAC3 791 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 GLIS3Q8NEA6 775 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 C8orf48Q96LL4 319 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 SNX25Q9H3E2 840 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 CFAP97Q9P2B7 532 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 WASF3Q9UPY6 502 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 NME7Q9Y5B8 376 aa22.52■■□□□ 1.2
TRAF4-203ENST00000394925 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 KAT7O95251 611 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 OLFM2O95897 454 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 OAS1P00973 400 aaKnown RBP22.51■■□□□ 1.19
TRAF4-203ENST00000394925 P2RY2P41231 377 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 IFRD2Q12894 506 aaPredicted RBP22.51■■□□□ 1.19
TRAF4-203ENST00000394925 RESTQ13127 1097 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 TRIM61Q5EBN2 209 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 TDRD10Q5VZ19 366 aaKnown RBP22.51■■□□□ 1.19
TRAF4-203ENST00000394925 RHBDF2Q6PJF5 856 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 TRAPPC11Q7Z392 1133 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 C12orf40Q86WS4 652 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 TMEFF1Q8IYR6 380 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 FRMD1Q8N878 549 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 KIAA1958Q8N8K9 716 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 DEFB124Q8NES8 71 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 OR6B3Q8NGW1 331 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 WHAMMQ8TF30 809 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 HPS3Q969F9 1004 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 POLMQ9NP87 494 aaPredicted RBP22.51■■□□□ 1.19
TRAF4-203ENST00000394925 ZDHHC4Q9NPG8 344 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 HSPBP1Q9NZL4 362 aa22.51■■□□□ 1.19
TRAF4-203ENST00000394925 BCCIPQ9P287 314 aaKnown RBP eCLIP22.51■■□□□ 1.19
TRAF4-203ENST00000394925 CST3P01034 146 aaPredicted RBP22.5■■□□□ 1.19
TRAF4-203ENST00000394925 MBL2P11226 248 aaPredicted RBP22.5■■□□□ 1.19
TRAF4-203ENST00000394925 CACNA2D1P54289 1103 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 KDSRQ06136 332 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 STXBP4Q6ZWJ1 553 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 WDR49Q8IV35 697 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 PDILTQ8N807 584 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 SPACA7Q96KW9 195 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 SLITRK1Q96PX8 696 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 FNBP1Q96RU3 617 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 ADAM33Q9BZ11 813 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 ARHGEF4Q9NR80 690 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 TMEM30AQ9NV96 361 aa22.5■■□□□ 1.19
TRAF4-203ENST00000394925 EVLQ9UI08 416 aaPredicted RBP22.5■■□□□ 1.19
TRAF4-203ENST00000394925 ZFYVE26Q68DK2 2539 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 ADH1CP00326 375 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 DLATP10515 647 aaKnown RBP22.49■■□□□ 1.19
TRAF4-203ENST00000394925 CHRM1P11229 460 aaPredicted RBP22.49■■□□□ 1.19
TRAF4-203ENST00000394925 ADH5P11766 374 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 PTPN1P18031 435 aaKnown RBP22.49■■□□□ 1.19
TRAF4-203ENST00000394925 EIF2DP41214 584 aaKnown RBP22.49■■□□□ 1.19
TRAF4-203ENST00000394925 PTGER3P43115 390 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 MAPK8P45983 427 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 LMAN2Q12907 356 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 HSF5Q4G112 596 aaPredicted RBP22.49■■□□□ 1.19
TRAF4-203ENST00000394925 EOGTQ5NDL2 527 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 PGBD3Q8N328 593 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 RDH13Q8NBN7 331 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 HMGB4Q8WW32 186 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 NUSAP1Q9BXS6 441 aaKnown RBP22.49■■□□□ 1.19
TRAF4-203ENST00000394925 ZNF518BQ9C0D4 1074 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 UPF2Q9HAU5 1272 aaKnown RBP22.49■■□□□ 1.19
TRAF4-203ENST00000394925 TMEM74BQ9NUR3 256 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 MBD1Q9UIS9 605 aaPredicted RBP22.49■■□□□ 1.19
TRAF4-203ENST00000394925 CACNA1EQ15878 2313 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 TNRC6BQ9UPQ9 1833 aaKnown RBP22.49■■□□□ 1.19
TRAF4-203ENST00000394925 PCNX2A6NKB5 2137 aa22.49■■□□□ 1.19
TRAF4-203ENST00000394925 SPEGQ15772 3267 aa22.48■■□□□ 1.19
TRAF4-203ENST00000394925 CLDN5O00501 218 aa22.48■■□□□ 1.19
TRAF4-203ENST00000394925 TNFRSF10BO14763 440 aa22.48■■□□□ 1.19
TRAF4-203ENST00000394925 TNNI1P19237 187 aa22.48■■□□□ 1.19
TRAF4-203ENST00000394925 PDCP20941 246 aa22.48■■□□□ 1.19
TRAF4-203ENST00000394925 HOXD13P35453 343 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms