RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 OCEL1Q9H607 264 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 FAM49BQ9NUQ9 324 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 TAS2R1Q9NYW7 299 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 GGA2Q9UJY4 613 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 PPM1HQ9ULR3 514 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 TSC22D4Q9Y3Q8 395 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 RNF103-CHMP3A0A140T963 221 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 INO80B-WBP1J3KQ70 363 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 EDF1O60869 148 aaKnown RBP9.19□□□□□ -0.94
RTN4-206ENST00000394611 PARNO95453 639 aaKnown RBP9.19□□□□□ -0.94
RTN4-206ENST00000394611 ANPEPP15144 967 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 PTGIRP43119 386 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 POU5F1BQ06416 359 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 CDC42EP5Q6NZY7 148 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 NAT16Q8N8M0 369 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 CNKSR2Q8WXI2 1034 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 THAP11Q96EK4 314 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 INO80BQ9C086 356 aaPredicted RBP9.19□□□□□ -0.94
RTN4-206ENST00000394611 CCDC90BQ9GZT6 254 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 WWP1Q9H0M0 922 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 THEGQ9P2T0 379 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 SLC17A6Q9P2U8 582 aa9.19□□□□□ -0.94
RTN4-206ENST00000394611 SPDYE2BA6NHP3 402 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 WNT10BO00744 389 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 CFHP08603 1231 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 TFPTP0C1Z6 253 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 SPDYE6P0CI01 402 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 TYK2P29597 1187 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 RHBDL3P58872 404 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 SBK1Q52WX2 424 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 C16orf86Q6ZW13 317 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 ANO5Q75V66 913 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 SV2AQ7L0J3 742 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 ZNF720Q7Z2F6 126 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 HPS6Q86YV9 775 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.18□□□□□ -0.941e-6■■■■■ 116
RTN4-206ENST00000394611 ACER1Q8TDN7 264 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 CENPTQ96BT3 561 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 FAM163AQ96GL9 167 aaPredicted RBP9.18□□□□□ -0.94
RTN4-206ENST00000394611 HERPUD2Q9BSE4 406 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 MSTO1Q9BUK6 570 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 GTSE1Q9NYZ3 720 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 ATICP31939 592 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 AQP4P55087 323 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 ZNF280AP59817 542 aaPredicted RBP9.18□□□□□ -0.94
RTN4-206ENST00000394611 BST1Q10588 318 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 SLC5A9Q2M3M2 681 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 CNPY1Q3B7I2 92 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 ANKRD22Q5VYY1 191 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 ATG16L1Q676U5 607 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 TRABD2AQ86V40 505 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 UBA3Q8TBC4 463 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 PTPRN2Q92932 1015 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 AGBL1Q96MI9 1066 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 NLRP4Q96MN2 994 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 UNC45AQ9H3U1 944 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 Q9H521 79 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 AVPR1AP37288 418 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 RAP1GAPP47736 663 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 LMNB2Q03252 620 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 RIPK1Q13546 671 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 HSP90AA5PQ58FG0 334 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 FAM102AQ5T9C2 384 aaPredicted RBP9.18□□□□□ -0.94
RTN4-206ENST00000394611 SWSAP1Q6NVH7 229 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 DAGLBQ8NCG7 672 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 OLFM3Q96PB7 478 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 SRPK1Q96SB4 655 aaKnown RBP9.18□□□□□ -0.94
RTN4-206ENST00000394611 EBF4Q9BQW3 602 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 POLR3CQ9BUI4 534 aaPredicted RBP9.18□□□□□ -0.94
RTN4-206ENST00000394611 RNPEPQ9H4A4 650 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 RRAGCQ9HB90 399 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 PDP2Q9P2J9 529 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 GABBR1Q9UBS5 961 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 TMEM59LQ9UK28 342 aa9.18□□□□□ -0.94
RTN4-206ENST00000394611 HEMK1Q9Y5R4 338 aaPredicted RBP9.18□□□□□ -0.94
RTN4-206ENST00000394611 ATXN2Q99700 1313 aaKnown RBP9.17□□□□□ -0.94
RTN4-206ENST00000394611 ADRB2P07550 413 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 TFE3P19532 575 aaPredicted RBP9.17□□□□□ -0.94
RTN4-206ENST00000394611 ADARP55265 1226 aaKnown RBP9.17□□□□□ -0.94
RTN4-206ENST00000394611 DGKZQ13574 1117 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 MAPK11Q15759 364 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 ETNPPLQ8TBG4 499 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 ZBTB45Q96K62 511 aaPredicted RBP9.17□□□□□ -0.94
RTN4-206ENST00000394611 LRMDAQ9H2I8 198 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 TMEM206Q9H813 350 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 SIX2Q9NPC8 291 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 SNX13Q9Y5W8 968 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 E7ENQ6 273 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 USP12O75317 370 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 GPC4O75487 556 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 HLA-DRAP01903 254 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 PAEPP09466 180 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 PHKA2P46019 1235 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 YARSP54577 528 aaKnown RBP9.17□□□□□ -0.94
RTN4-206ENST00000394611 FMO1Q01740 532 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 MTMR1Q13613 665 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 FLOT2Q14254 428 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 CEP55Q53EZ4 464 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 SAPCD2Q86UD0 394 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms