RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 ATF7IP2Q5U623 682 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 SLC8B1Q6J4K2 584 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 SLC27A1Q6PCB7 646 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 APBB1IPQ7Z5R6 666 aaPredicted RBP11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 CCDC150Q8NCX0 1101 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 TTC8Q8TAM2 541 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 TMC2Q8TDI7 906 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 RSPRY1Q96DX4 576 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 SAAL1Q96ER3 474 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 ZBTB45Q96K62 511 aaPredicted RBP11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 ZNF512Q96ME7 567 aaPredicted RBP11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 TMEM209Q96SK2 561 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 MSTO1Q9BUK6 570 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 CYP4F11Q9HBI6 524 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 ASAH2Q9NR71 780 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 EBF1Q9UH73 591 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 RAXQ9Y2V3 346 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 ACACAQ13085 2346 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 CACNA1EQ15878 2313 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 KIF26AQ9ULI4 1882 aaPredicted RBP11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 TMEM189-UBE2V1I3L0A0 370 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 NRDCO43847 1150 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 C1QL1O75973 258 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 NPTXRO95502 500 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 APBB3O95704 486 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 THP07101 528 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 GJA1P17302 382 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 ARF4P18085 180 aaPredicted RBP11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 CETN1Q12798 172 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 HNRNPDQ14103 355 aaKnown RBP11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 TEAD2Q15562 447 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 MPZL3Q6UWV2 235 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 CBWD2Q8IUF1 395 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 HS6ST3Q8IZP7 471 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 SLC39A7Q92504 469 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 SLC35C1Q96A29 364 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 DDX27Q96GQ7 796 aaKnown RBP11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 FAM213AQ9BRX8 229 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 NUSAP1Q9BXS6 441 aaKnown RBP11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 SNTG2Q9NY99 539 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 TNFSF13BQ9Y275 285 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 USP20Q9Y2K6 914 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 RAI2Q9Y5P3 530 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 THADAQ6YHU6 1953 aa11.81□□□□□ -0.52
VTI1BP2-201ENST00000394154 GTPBP10A4D1E9 387 aaKnown RBP11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 AKR1B15C9JRZ8 316 aaPredicted RBP11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 PTGESO14684 152 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 OGTO15294 1046 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 TRAPPC3O43617 180 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 EDN1P05305 212 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 TKTP29401 623 aaKnown RBP11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 MAPK8P45983 427 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 MCCD1P59942 119 aaPredicted RBP11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 MCL1Q07820 350 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 CYP24A1Q07973 514 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 NOLC1Q14978 699 aaKnown RBP eCLIP11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 AMHR2Q16671 573 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 KYAT1Q16773 422 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 ITPRIPL2Q3MIP1 535 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 TRIM61Q5EBN2 209 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 TMEM196Q5HYL7 178 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 GBP6Q6ZN66 633 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 ZNF605Q86T29 641 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 HDDC3Q8N4P3 179 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 ZSWIM2Q8NEG5 633 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 NEK11Q8NG66 645 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 MDM1Q8TC05 714 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 CPLX3Q8WVH0 158 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 ZFYVE19Q96K21 471 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 MMRN2Q9H8L6 949 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 OBP2AQ9NY56 170 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 SIK3Q9Y2K2 1263 aa11.8□□□□□ -0.52
VTI1BP2-201ENST00000394154 NUP210Q8TEM1 1887 aaPredicted RBP11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 TTLL13PA6NNM8 815 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 TULP1O00294 542 aaPredicted RBP11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 DPYSL4O14531 572 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 P4HA2O15460 535 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 B4GALT5O43286 388 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 RNF40O75150 1001 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 B3GAT3O94766 335 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 SEC24AO95486 1093 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 ADRB2P07550 413 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 MCF2P10911 925 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 HARSP12081 509 aaKnown RBP11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 ENGP17813 658 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 TRIM21P19474 475 aaKnown RBP11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 PROZP22891 400 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 GTF2H1P32780 548 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 FMO5P49326 533 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 ACOT2P49753 483 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 PSMD6Q15008 389 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 SURF1Q15526 300 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 NAB2Q15742 525 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 EXOC3L4Q17RC7 722 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 ZNF568Q3ZCX4 644 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 USP39Q53GS9 565 aaKnown RBP11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 FIGNQ5HY92 759 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 TPGS2Q68CL5 300 aa11.79□□□□□ -0.52
VTI1BP2-201ENST00000394154 FSTL4Q6MZW2 842 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms