RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TSPAN16Q9UKR8 245 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 ZNF638Q14966 1978 aaKnown RBP20.08■□□□□ 0.8
PDLIM7-204ENST00000393546 DENND4CQ5VZ89 1909 aa20.08■□□□□ 0.8
PDLIM7-204ENST00000393546 HHLA1C9JL84 531 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 DPYSL4O14531 572 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 TADA3O75528 432 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 ABL1P00519 1130 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 FCARP24071 287 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 AVPR1AP37288 418 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 USP8P40818 1118 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 VIPR2P41587 438 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 TPM4P67936 248 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 KLHDC7AQ5VTJ3 777 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 LCLAT1Q6UWP7 414 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 CMTM8Q8IZV2 173 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 PLA2G2FQ9BZM2 168 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 CBX8Q9HC52 389 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 TRPC7Q9HCX4 862 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 CHORDC1Q9UHD1 332 aaPredicted RBP20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 DUSP12Q9UNI6 340 aa20.07■□□□□ 0.8
PDLIM7-204ENST00000393546 ZNF840PA6NDX5 716 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 LGALS16A8MUM7 142 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 O00370 1275 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 SRFP11831 508 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 ATP1A3P13637 1013 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 PDE6CP51160 858 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 BCAT1P54687 386 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 UBXN1Q04323 297 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 SIGLEC14Q08ET2 396 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 DPY19L2P1Q6NXN4 242 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 TRIM67Q6ZTA4 783 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 TTC30AQ86WT1 665 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 GPIHBP1Q8IV16 184 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 TFAP2BQ92481 460 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 SHC3Q92529 594 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 SMOC2Q9H3U7 446 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 PLCB1Q9NQ66 1216 aa20.06■□□□□ 0.8
PDLIM7-204ENST00000393546 TRAV19A0A0A6YYK7 116 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 FAM92AA1XBS5 289 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 HEPACAM2A8MVW5 462 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 NARSO43776 548 aaKnown RBP20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 USP17L7P0C7H9 530 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 PFKLP17858 780 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 RFX1P22670 979 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 BRD2P25440 801 aaKnown RBP20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 PDE4CQ08493 712 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 BST2Q10589 180 aaKnown RBP20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 MFSD6LQ8IWD5 586 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 CELF5Q8N6W0 485 aaKnown RBP20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 UBA3Q8TBC4 463 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 DEPDC1BQ8WUY9 529 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 PCMTD1Q96MG8 357 aaPredicted RBP20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 C1QTNF1Q9BXJ1 281 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 OBP2AQ9NY56 170 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 SCML2Q9UQR0 700 aa20.05■□□□□ 0.8
PDLIM7-204ENST00000393546 NCANO14594 1321 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 FOXN3O00409 490 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 XPO1O14980 1071 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 MED7O43513 233 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 CALCAP01258 141 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 SETSIPP0DME0 302 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 PSMC3P17980 439 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 HDCP19113 662 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 KIF11P52732 1056 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 GPC5P78333 572 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 RAPGEF1Q13905 1077 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 FILIP1LQ4L180 1135 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 VITQ6UXI7 678 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 APTXQ7Z2E3 356 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 GPRIN1Q7Z2K8 1008 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 PIGZQ86VD9 579 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 YAF2Q8IY57 180 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 CYP2S1Q96SQ9 504 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 TRMT61BQ9BVS5 477 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 SLC2A4RGQ9NR83 387 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 TLR8Q9NR97 1041 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 TDP1Q9NUW8 608 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 AJAP1Q9UKB5 411 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 FBXL21Q9UKT6 434 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 OBSL1O75147 1896 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 ANAPC1Q9H1A4 1944 aa20.04■□□□□ 0.8
PDLIM7-204ENST00000393546 MUC3AQ02505 3323 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 C2orf78A6NCI8 922 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 GOLGA6L19H0YKK7 550 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 THAP12O43422 761 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 CKMP06732 381 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 UCHL3P15374 230 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 GNA15P30679 374 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 PTK2Q05397 1052 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 DRAP1Q14919 205 aaPredicted RBP20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 SYCP1Q15431 976 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 SNX30Q5VWJ9 437 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 ARL14EPQ8N8R7 260 aaPredicted RBP20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 ZNF606Q8WXB4 792 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 ZSWIM1Q9BR11 485 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 STK33Q9BYT3 514 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 SMG9Q9H0W8 520 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 KIF9Q9HAQ2 790 aa20.03■□□□□ 0.8
PDLIM7-204ENST00000393546 LRRC4Q9HBW1 653 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms