RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 ZNF446Q9NWS9 450 aa18.36■□□□□ 0.53
MBD4-202ENST00000393278 AMACRQ9UHK6 382 aa18.36■□□□□ 0.53
MBD4-202ENST00000393278 NRP1O14786 923 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 TRAPPC3O43617 180 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 RALAP11233 206 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 IL1R2P27930 398 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 MIPP30301 263 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 RFC2P35250 354 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 CETN2P41208 172 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 COPS2P61201 443 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 TSPY1Q01534 308 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 ADCY1Q08828 1119 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 ADIGQ0VDE8 80 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 SMC1AQ14683 1233 aaKnown RBP18.35■□□□□ 0.53
MBD4-202ENST00000393278 MAPRE1Q15691 268 aaKnown RBP18.35■□□□□ 0.53
MBD4-202ENST00000393278 CCDC14Q49A88 953 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 CCNI2Q6ZMN8 369 aaPredicted RBP18.35■□□□□ 0.53
MBD4-202ENST00000393278 MTERF4Q7Z6M4 381 aaKnown RBP18.35■□□□□ 0.53
MBD4-202ENST00000393278 ZMIZ2Q8NF64 920 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 RNF25Q96BH1 459 aaPredicted RBP18.35■□□□□ 0.53
MBD4-202ENST00000393278 VWCEQ96DN2 955 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 CFAP57Q96MR6 1250 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 SLITRK1Q96PX8 696 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 TMEM209Q96SK2 561 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 HERPUD2Q9BSE4 406 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 OSBPL8Q9BZF1 889 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 UBXN6Q9BZV1 441 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 LRRC4Q9HBW1 653 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 CSNK1G1Q9HCP0 422 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 KLHL11Q9NVR0 708 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 MICAL3Q7RTP6 2002 aa18.35■□□□□ 0.53
MBD4-202ENST00000393278 TADA2AO75478 443 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 TNFRSF8P28908 595 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 SDC4P31431 198 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 CHRNA3P32297 505 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 CTCFP49711 727 aaPredicted RBP18.34■□□□□ 0.53
MBD4-202ENST00000393278 CDR1P51861 262 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 KLF1Q13351 362 aaPredicted RBP18.34■□□□□ 0.53
MBD4-202ENST00000393278 LLGL1Q15334 1064 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 C15orf59Q2T9L4 293 aaPredicted RBP18.34■□□□□ 0.53
MBD4-202ENST00000393278 ZFYVE27Q5T4F4 411 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 ANKS1BQ7Z6G8 1248 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 C12orf50Q8NA57 414 aaPredicted RBP18.34■□□□□ 0.53
MBD4-202ENST00000393278 MAGOHBQ96A72 148 aaKnown RBP18.34■□□□□ 0.53
MBD4-202ENST00000393278 HINFPQ9BQA5 517 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 GDF3Q9NR23 364 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 TMEM30AQ9NV96 361 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 TMLHEQ9NVH6 421 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 ADAM28Q9UKQ2 775 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 USP18Q9UMW8 372 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 TBKBP1A7MCY6 615 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 PI4K2BG5E9Z4 385 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 SYN3O14994 580 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 SEC31AO94979 1220 aaKnown RBP18.34■□□□□ 0.53
MBD4-202ENST00000393278 OAZ2O95190 189 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 PTPN7P35236 360 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 SLC11A1P49279 550 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 CACNA2D1P54289 1103 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 GUCY2DQ02846 1103 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 IKBKEQ14164 716 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 EFHC1Q5JVL4 640 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 BEND6Q5SZJ8 279 aaPredicted RBP18.34■□□□□ 0.53
MBD4-202ENST00000393278 SH3PXD2AQ5TCZ1 1133 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 MFSD7Q6UXD7 560 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.34■□□□□ 0.53
MBD4-202ENST00000393278 LRRTM3Q86VH5 581 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 IFT20Q8IY31 132 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 RAPGEF5Q92565 580 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 TMEM175Q9BSA9 504 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 COLEC11Q9BWP8 271 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 PLEKHA4Q9H4M7 779 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 ZWILCHQ9H900 591 aa18.34■□□□□ 0.53
MBD4-202ENST00000393278 ZSCAN5CA6NGD5 496 aaPredicted RBP18.33■□□□□ 0.52
MBD4-202ENST00000393278 BHMG1C9JSJ3 638 aaPredicted RBP18.33■□□□□ 0.52
MBD4-202ENST00000393278 TRUB2O95900 331 aaKnown RBP18.33■□□□□ 0.52
MBD4-202ENST00000393278 ALDH2P05091 517 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 DESP17661 470 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 PTPN9P43378 593 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 FNTAP49354 379 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 MRPS5P82675 430 aaKnown RBP18.33■□□□□ 0.52
MBD4-202ENST00000393278 DHX34Q14147 1143 aaKnown RBP18.33■□□□□ 0.52
MBD4-202ENST00000393278 SMTNL2Q2TAL5 461 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 MAP9Q49MG5 647 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 ODF2Q5BJF6 829 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 RAB41Q5JT25 222 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 SPOCD1Q6ZMY3 1216 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 SIX6OS1Q8N1H7 587 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 ACSF2Q96CM8 615 aaPredicted RBP18.33■□□□□ 0.52
MBD4-202ENST00000393278 RUNDC3BQ96NL0 473 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 KCNK16Q96T55 309 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 NCAPGQ9BPX3 1015 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 HEMGNQ9BXL5 484 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 LRRC19Q9H756 370 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 EPB41L5Q9HCM4 733 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 MARCH5Q9NX47 278 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 HCSTQ9UBK5 93 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 PCSK1NQ9UHG2 260 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 PCYOX1Q9UHG3 505 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 FAN1Q9Y2M0 1017 aa18.33■□□□□ 0.52
MBD4-202ENST00000393278 LRRD1A4D1F6 860 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms