RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 FYNP06241 537 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 ZNF177Q13360 481 aaPredicted RBP13.86□□□□□ -0.19
GSE1-202ENST00000393243 ORC2Q13416 577 aaPredicted RBP13.86□□□□□ -0.19
GSE1-202ENST00000393243 CSHL1Q14406 222 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 STARD3Q14849 445 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 MTFR1Q15390 333 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 TAF5Q15542 800 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 AGAP9Q5VTM2 703 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 C11orf88Q6PI97 169 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 TBC1D16Q8TBP0 767 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 UTP15Q8TED0 518 aaKnown RBP13.86□□□□□ -0.19
GSE1-202ENST00000393243 MRPL39Q9NYK5 338 aaKnown RBP13.86□□□□□ -0.19
GSE1-202ENST00000393243 ADAMTS12P58397 1594 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 SLC37A4O43826 429 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 FGFR1P11362 822 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 MAPK9P45984 424 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 ALX1Q15699 326 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 NLRP9Q7RTR0 991 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 STRA8Q7Z7C7 330 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 COMMD2Q86X83 199 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 UNC45BQ8IWX7 931 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 SCUBE1Q8IWY4 988 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 TRPC5OSA6NMA1 111 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 CFAP99D6REC4 459 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 GNASQ5JWF2 1037 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 NAPEPLDQ6IQ20 393 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 OOSP2Q86WS3 158 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 SIX5Q8N196 739 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 KRT35Q92764 455 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 GFM2Q969S9 779 aaKnown RBP13.86□□□□□ -0.19
GSE1-202ENST00000393243 ACOX2Q99424 681 aa13.86□□□□□ -0.19
GSE1-202ENST00000393243 DYTNA2CJ06 578 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 C2orf81A6NN90 581 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 TMED8Q6PL24 325 aaPredicted RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 ATG16L2Q8NAA4 619 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 TMEM106CQ9BVX2 250 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 TEX13BQ9BXU2 312 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 RRM2P31350 389 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 IL5RAQ01344 420 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 TDRD5Q8NAT2 981 aaKnown RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 ANKS1AQ92625 1134 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 SIKE1Q9BRV8 207 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 KCNH7Q9NS40 1196 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 AFF2P51816 1311 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 A0A1B0GW55 424 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 LTFP02788 710 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 DUX4L2P0CJ85 424 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 DUX4L3P0CJ86 424 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 DUX4L4P0CJ87 422 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 DUX4L5P0CJ88 424 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 DUX4L6P0CJ89 424 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 DUX4L7P0CJ90 424 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 NQO1P15559 274 aaKnown RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 DNAJB2P25686 324 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 PLCL1Q15111 1095 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 OTUD3Q5T2D3 398 aaPredicted RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 TMEM120AQ9BXJ8 343 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 REXO4Q9GZR2 422 aaKnown RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 DUX4Q9UBX2 424 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 SSU72P8A0A1W2PR75 194 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 CLK2P49760 499 aaKnown RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 CAMK2GQ13555 558 aaPredicted RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 EZH2Q15910 746 aaKnown RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 EFHC1Q5JVL4 640 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 SAPCD2Q86UD0 394 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 MXRA8Q9BRK3 442 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 MRPS26Q9BYN8 205 aaKnown RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 FHDC1Q9C0D6 1143 aaPredicted RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 COPS7BQ9H9Q2 264 aaPredicted RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 FOXN3O00409 490 aaPredicted RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 IL18RAPO95256 599 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 IRX1P78414 480 aaPredicted RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 PHACTR4Q8IZ21 702 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 RNF148Q8N7C7 305 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 FIG4Q92562 907 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 FICDQ9BVA6 458 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 MAP10Q9P2G4 905 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 MCM8Q9UJA3 840 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 TPH1P17752 444 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 SOX10P56693 466 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 RPL10AP62906 217 aaKnown RBP13.85□□□□□ -0.19
GSE1-202ENST00000393243 RD3Q7Z3Z2 195 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 NECAB2Q7Z6G3 386 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 RPS6KB2Q9UBS0 482 aa13.85□□□□□ -0.19
GSE1-202ENST00000393243 NFICP08651 508 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 HPGDP15428 266 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 ACADSBP45954 432 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 KCNV1Q6PIU1 500 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 NIF3L1Q9GZT8 377 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 VIPAS39Q9H9C1 493 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 VTA1Q9NP79 307 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 PDZK1P1A8MUH7 402 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 MBL2P11226 248 aaPredicted RBP13.84□□□□□ -0.19
GSE1-202ENST00000393243 PSMB9P28065 219 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 HALP42357 657 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 SLC47A2Q86VL8 602 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 EMC1Q8N766 993 aa13.84□□□□□ -0.19
GSE1-202ENST00000393243 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■■■■ 49.4
GSE1-202ENST00000393243 SLITRK1Q96PX8 696 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms