RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 RAVER1Q8IY67 606 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 SPATA20Q8TB22 786 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 SYN2Q92777 582 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 JMJD4Q9H9V9 463 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 SACM1LQ9NTJ5 587 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 DDX43Q9NXZ2 648 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 GMIPQ9P107 970 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 PSMC3IPQ9P2W1 217 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 GNEQ9Y223 722 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 IPPQ9Y573 584 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 SNX5Q9Y5X3 404 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 FAM205CA6NFA0 338 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 M0QX08 132 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 RHOBTB3O94955 611 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 DLATP10515 647 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 CCNA2P20248 432 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 GUCY1A2P33402 732 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 COILP38432 576 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 DRG2P55039 364 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 SLC25A3Q00325 362 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 EFTUD2Q15029 972 aaKnown RBP eCLIP7.92□□□□□ -1.143e-6■■■■■ 41.9
VTI1A-201ENST00000393077 NRF1Q16656 503 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 AGAP9Q5VTM2 703 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 VSTM1Q6UX27 236 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 RFPL4BQ6ZWI9 263 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 VASH1Q7L8A9 365 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 ITIH5Q86UX2 942 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 TBC1D10CQ8IV04 446 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 SLC35G2Q8TBE7 412 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 KBTBD7Q8WVZ9 684 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 PLA2G12BQ9BX93 195 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 RNF26Q9BY78 433 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 FRMD8Q9BZ67 464 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 SP140LQ9H930 580 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 COPS7BQ9H9Q2 264 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 MRPL40Q9NQ50 206 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 MRPL39Q9NYK5 338 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 EMC3Q9P0I2 261 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 TLK1Q9UKI8 766 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 RAB26Q9ULW5 256 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 IFT52Q9Y366 437 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 ACTL7BQ9Y614 415 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 RGPD8O14715 1765 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 ZNF609O15014 1411 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 CAMTA1Q9Y6Y1 1673 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 FLT1P17948 1338 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 MON2Q7Z3U7 1717 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 OAS1P00973 400 aaKnown RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 PLCG1P19174 1290 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 ATP2B4P23634 1241 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 GRK2P25098 689 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 BTDP43251 543 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 GNA12Q03113 381 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 BNIP3Q12983 259 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 PDK1Q15118 436 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 TGFBIQ15582 683 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 GALNT7Q86SF2 657 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 ZNF410Q86VK4 478 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 GRPEL2Q8TAA5 225 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 FNIP1Q8TF40 1166 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 KCTD4Q8WVF5 259 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 BIRC8Q96P09 236 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 CCDC90BQ9GZT6 254 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 SMARCAD1Q9H4L7 1026 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 KANSL2Q9H9L4 492 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 NAGPAQ9UK23 515 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 VPS4AQ9UN37 437 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 TRAFD1O14545 582 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 AIM2O14862 343 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 USP17L8P0C7I0 530 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 ITIH1P19827 911 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 RCVRNP35243 200 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 RPA3P35244 121 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 NAMPTP43490 491 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 SERPINH1P50454 418 aaKnown RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 RAD23AP54725 363 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 CASP7P55210 303 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 GRAPQ13588 217 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 SNX17Q15036 470 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 DCAF6Q58WW2 860 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 FAM26FQ5R3K3 315 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 C6orf52Q5T4I8 152 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 TEDDM1Q5T9Z0 273 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 RTKN2Q8IZC4 609 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 PQLC1Q8N2U9 271 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 TAB3Q8N5C8 712 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 GRAPLQ8TC17 118 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 CYGBQ8WWM9 190 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 ZSCAN10Q96SZ4 725 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 DBNDD1Q9H9R9 158 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 SIK3Q9Y2K2 1263 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 STXBP5LQ9Y2K9 1186 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 A0A087X0B3 334 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 KLRF2D3W0D1 207 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 ADAM23O75077 832 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 NTSR2O95665 410 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 PROCP04070 461 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 CDH2P19022 906 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 ITGAXP20702 1163 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms