RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 NCAPHQ15003 741 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 POMGNT2Q8NAT1 580 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 LXNQ9BS40 222 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 ANAPC2Q9UJX6 822 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 TIMM44O43615 452 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 PHF2O75151 1096 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 FAUP35544 74 aaKnown RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 BTN3A2P78410 334 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 ITIH4Q14624 930 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 USP10Q14694 798 aaKnown RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 C18orf8Q96DM3 657 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 RNF146Q9NTX7 359 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 A0A1W2PQC6 194 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 YY1P25490 414 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 QARSP47897 775 aaKnown RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 EIF2B2P49770 351 aaKnown RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 SKIV2LQ15477 1246 aaKnown RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 SPIRE2Q8WWL2 714 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 TRMT6Q9UJA5 497 aaKnown RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 KCNJ6P48051 423 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 POLD3Q15054 466 aaPredicted RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 FBXO38Q6PIJ6 1188 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 GALNT4Q8N4A0 578 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 REPS1Q96D71 796 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 MINPP1Q9UNW1 487 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 HECW2Q9P2P5 1572 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 FTLP02792 175 aaPredicted RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 PPP1R36Q96LQ0 422 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 FAM210AQ96ND0 272 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 SAE1Q9UBE0 346 aaPredicted RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 CDK12Q9NYV4 1490 aaPredicted RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 MYO9BQ13459 2157 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 STK36Q9NRP7 1315 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 AIM2O14862 343 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 GPC1P35052 558 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 ETFBP38117 255 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 RHAGQ02094 409 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 SV2CQ496J9 727 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 SCARA3Q6AZY7 606 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 GPR63Q9BZJ6 419 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 MUC3BQ9H195 1237 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 RBAKQ9NYW8 714 aaPredicted RBP15.22■□□□□ 0.03
CCDC50-201ENST00000392455 CCDC59Q9P031 241 aaKnown RBP15.22■□□□□ 0.03
CCDC50-201ENST00000392455 POLG2Q9UHN1 485 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 CNOT7Q9UIV1 285 aaKnown RBP15.22■□□□□ 0.03
CCDC50-201ENST00000392455 CROCC2H7BZ55 1655 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 MGAT4DA6NG13 374 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 VPS4BO75351 444 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 CYP2E1P05181 493 aaPredicted RBP15.22■□□□□ 0.03
CCDC50-201ENST00000392455 DRAP1Q14919 205 aaPredicted RBP15.22■□□□□ 0.03
CCDC50-201ENST00000392455 NECTIN1Q15223 517 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 SLC7A14Q8TBB6 771 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 RSAD1Q9HA92 442 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 PTCH1Q13635 1447 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 PRDX5P30044 214 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 MRNIPQ6NTE8 343 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 KDELC2Q7Z4H8 507 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 SYNE4Q8N205 404 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF507Q8TCN5 953 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 OTUD5Q96G74 571 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 Q96MT0 163 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 POLR1DQ9Y2S0 133 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 CPDO75976 1380 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 XRCC4Q13426 336 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 SF3B3Q15393 1217 aaKnown RBP15.22■□□□□ 0.03
CCDC50-201ENST00000392455 PCSK1P29120 753 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 HARS2P49590 506 aaKnown RBP15.22■□□□□ 0.03
CCDC50-201ENST00000392455 GPSM2P81274 684 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 TRMT5Q32P41 509 aaKnown RBP15.22■□□□□ 0.03
CCDC50-201ENST00000392455 PEX5LQ8IYB4 626 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 PHF11Q9UIL8 331 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 SLC39A10Q9ULF5 831 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 WDR19Q8NEZ3 1342 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 PVALEFA0A1B0GWK0 134 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 IL18RAPO95256 599 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 MUTP22033 750 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 TWF1Q12792 350 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 FAM220AQ7Z4H9 259 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 COMMD2Q86X83 199 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 GPD1LQ8N335 351 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 SLC44A5Q8NCS7 719 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 RORBQ92753 470 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 INTS2Q9H0H0 1204 aaKnown RBP15.22■□□□□ 0.03
CCDC50-201ENST00000392455 RAD18Q9NS91 495 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 CRNNQ9UBG3 495 aaPredicted RBP15.22■□□□□ 0.03
CCDC50-201ENST00000392455 SIK3Q9Y2K2 1263 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 MYH7P12883 1935 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 TNFAIP8O95379 198 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 VMP1Q96GC9 406 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 FAM129BQ96TA1 746 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 WWOXQ9NZC7 414 aa15.22■□□□□ 0.03
CCDC50-201ENST00000392455 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 GARTP22102 1010 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 TMEM132BQ14DG7 1078 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 FAM98BQ52LJ0 330 aaKnown RBP15.21■□□□□ 0.03
CCDC50-201ENST00000392455 AGR3Q8TD06 166 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 SKA1Q96BD8 255 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 BCLAF3A2AJT9 711 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms